Lactiplantibacillus plantarum ST-III: LPST_C2347
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Entry
LPST_C2347 CDS
T01324
Symbol
nth1
Name
(GenBank) DNA-(apurinic or apyrimidinic site) lyase
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
lps
Lactiplantibacillus plantarum ST-III
Pathway
lps03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lps00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LPST_C2347 (nth1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lps03400
]
LPST_C2347 (nth1)
Enzymes [BR:
lps01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
LPST_C2347 (nth1)
DNA repair and recombination proteins [BR:
lps03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LPST_C2347 (nth1)
Prokaryotic type
LPST_C2347 (nth1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
Motif
Other DBs
NCBI-ProteinID:
ADN99562
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All DBs
Position
complement(2517347..2517997)
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AA seq
216 aa
AA seq
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MLKDDQIVWAIHQMEADIGPVGPSLDSRTPFQYLISVILSAQATDVSVNKVTPVLFEKYP
EPKDLMAADVADVEAIIKSVGLFHNKARNIIKTARIVHEELADVVPTDRKGIMALPGAGR
KTANVVLSDVFEQPTFAVDTHVSAISKRLHFVAQTATPLQVEQKIVSVLAPAELHQAHHT
MIEYGRKYSMKLTPDKEVCQLIIDCDKLNEENEALI
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atgctaaaagatgatcagatcgtgtgggcaattcaccaaatggaagcagacatcggacca
gtggggccttccctggactcgcggacgccgtttcagtatttgatttcagtaattctgagc
gctcaggcgaccgacgtctcggttaacaaggtgacgccggtgctgtttgagaagtatcca
gaaccaaaggacttgatggctgccgatgttgcggatgtggaagcaattatcaagagcgtc
ggattatttcataataaggcccgcaacatcattaaaacggcgcgcattgtccatgaagaa
ttagccgatgtcgtgcctaccgatcgtaaaggcatcatggcgttaccaggtgcgggccgc
aaaactgccaacgtggtattgagtgacgtttttgaacaaccgacgtttgctgtcgataca
cacgtctcggcaatctcgaaacgcttgcactttgtcgctcagaccgcgacgccgttacaa
gttgaacaaaaaatcgtgagtgtgttggcaccggcagaattacatcaagcccatcacacg
atgattgaatatgggcggaagtattcgatgaagttgacgccagacaaagaagtttgtcaa
ttgatcattgactgtgacaagttgaatgaggaaaatgaagcgttgatctag
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