Limnobaculum parvum: HYN51_05610
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Entry
HYN51_05610 CDS
T05491
Symbol
lpxC
Name
(GenBank) UDP-3-O-acyl-N-acetylglucosamine deacetylase
KO
K02535
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:
3.5.1.108
]
Organism
lpv
Limnobaculum parvum
Pathway
lpv00540
Lipopolysaccharide biosynthesis
lpv01100
Metabolic pathways
Module
lpv_M00060
KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type
Brite
KEGG Orthology (KO) [BR:
lpv00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
HYN51_05610 (lpxC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
lpv01005
]
HYN51_05610 (lpxC)
Enzymes [BR:
lpv01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.108 UDP-3-O-acyl-N-acetylglucosamine deacetylase
HYN51_05610 (lpxC)
Lipopolysaccharide biosynthesis proteins [BR:
lpv01005
]
Lipid A
HYN51_05610 (lpxC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxC
Motif
Other DBs
NCBI-ProteinID:
AWH88081
UniProt:
A0A2Y9TWY4
LinkDB
All DBs
Position
complement(2749190..2750122)
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AA seq
310 aa
AA seq
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MRDNMMIKQRTLKRIIQATGVGLHTGRKVSLTLRPAAANTGVIYRRTDLNPPVDFPADAK
SVRDTMLCTCLVNEDDVRISTVEHLNAALAGLGIDNIIIEVDAPEIPIMDGSAAPFVYLL
LDGGIEELNVPKKFIRITQPVRVEDGDKWAELTPFNGFSLDFTIDFNHPAIDSGSQRYRM
NFSADAFVRQISRARTFGFMRDIEYLQSKGLCLGGSFDCAIVVDDYRVLNEDGLRFEDEF
VRHKMLDAIGDLFMCGHNIIGAFTAFKSGHALNNKLLQAVLAKQEAWEYVTFEDEAEMPL
AFKTSRTVLA
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgcgagataatatgatgattaaacagcggacactaaaacgcatcattcaagctactggc
gtcggtcttcataccggacgcaaggttagcctgactctgcgcccggccgcagctaatacg
ggtgtcatctatcgtcgtactgacttgaatccaccggttgattttccggcagatgcaaaa
tccgtgcgtgataccatgttgtgtacttgcttggttaatgaagatgacgtgcgtatttct
actgtggaacaccttaatgctgcactcgcaggattaggtatcgacaacattattattgaa
gttgacgcaccagaaattccaattatggatggcagtgcggcaccttttgtctacttattg
ttagacggcggaattgaagaactaaacgtaccgaagaaattcatacgtattactcagcct
gttcgcgtcgaagacggtgacaagtgggctgaactgacaccgtttaatggtttcagctta
gattttactatcgatttcaaccatccggcgattgattccggctcacagcgctatcgtatg
aatttctctgccgatgcgtttgttcgtcagatcagccgtgcgcgtaccttcgggttcatg
cgtgatatcgaatatttacagtctaaaggtctgtgcctaggtggcagcttcgattgtgct
atcgtagtagatgattatcgtgtgctaaacgaagatggtctgcgttttgaagacgaattt
gttcgtcataaaatgttggatgctatcggtgatctgtttatgtgtggtcataacattatt
ggcgcatttactgcgttcaaatctggccacgcattgaacaacaagcttctgcaagcggta
ttagcgaaacaagaagcttgggaatacgttacttttgaagacgaagctgaaatgccattg
gcgttcaaaacgtcgagaactgtactggcttaa
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