Lactobacillus paragasseri: LpgJCM5343_09230
Help
Entry
LpgJCM5343_09230 CDS
T05840
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
lpw
Lactobacillus paragasseri
Pathway
lpw03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lpw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LpgJCM5343_09230 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lpw03400
]
LpgJCM5343_09230 (nth)
Enzymes [BR:
lpw01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
LpgJCM5343_09230 (nth)
DNA repair and recombination proteins [BR:
lpw03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LpgJCM5343_09230 (nth)
Prokaryotic type
LpgJCM5343_09230 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
HHH_5
RecR_HhH
DUF4294
Transposase_20
Motif
Other DBs
NCBI-ProteinID:
BBD48570
LinkDB
All DBs
Position
958277..958906
Genome browser
AA seq
209 aa
AA seq
DB search
MEKLLSDEEARLVLKRILSLYPDAKGELHWDTKFHLLCAVLMSAQTTDKMVNKTTPKFFN
DYPDSASLAQANIRDIEAHIRTIGLYRTKAKHLKETAQIITDKFNGEIPQDKKTLMTLPG
VGEKTANVVLAEGFKIPAIAVDTHVSRISKRFKIVGEKATPHEVEQRLEELLPKEEWIRT
HHAMILFGRYTMPARTKDQDPYSFLPPLK
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaattattatcggatgaagaagctcgattagttttaaaaagaattttatctctt
tatccggatgctaaaggagagcttcactgggatacaaagtttcatttactctgtgcagtt
ttaatgagtgcacaaactactgataagatggttaataaaacaacacctaaattttttaat
gactatcctgacagcgccagcttagcccaagctaatattagagatatcgaagcacatatt
cgcaccattggtttgtatcgcacaaaggctaagcatttaaaggaaacagcacagatcatt
acagacaagttcaatggtgaaattccccaggataaaaagactttaatgacattacctggc
gtaggagagaaaacagctaatgttgttttagcagaaggttttaaaatacctgcaattgca
gttgatactcatgtatcccgtatttctaaaagatttaagatagtgggggaaaaagcaact
ccccacgaggtagaacaacgtcttgaagaattacttccaaaagaagaatggattcgtacg
catcatgcaatgattttatttggccgatatacaatgccggctagaactaaagatcaagat
ccgtattcttttttaccacctttaaaatga
DBGET
integrated database retrieval system
