Lactobacillus paragasseri: LpgJCM5343_12630
Help
Entry
LpgJCM5343_12630 CDS
T05840
Symbol
patB
Name
(GenBank) cystathionine beta-lyase
KO
K14155
cysteine-S-conjugate beta-lyase [EC:
4.4.1.13
]
Organism
lpw
Lactobacillus paragasseri
Pathway
lpw00270
Cysteine and methionine metabolism
lpw00450
Selenocompound metabolism
lpw01100
Metabolic pathways
lpw01110
Biosynthesis of secondary metabolites
lpw01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
lpw00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
LpgJCM5343_12630 (patB)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
LpgJCM5343_12630 (patB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
lpw01007
]
LpgJCM5343_12630 (patB)
Enzymes [BR:
lpw01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.13 cysteine-S-conjugate beta-lyase
LpgJCM5343_12630 (patB)
Amino acid related enzymes [BR:
lpw01007
]
Aminotransferase (transaminase)
Class II
LpgJCM5343_12630 (patB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
BBD48910
LinkDB
All DBs
Position
complement(1302048..1303214)
Genome browser
AA seq
388 aa
AA seq
DB search
MDYDFTTVINRRHTDSVKWNVKDSELPMSIADMDFKTAPEIVLAMREKLELGAFGYEEAG
ADYFNAVSHWYQLEHGADADPDWMIFATGVVPAISSIVRRVSHIGDNVLVQEPVYNIFYN
SIENNGRHVLSSDLIYSNGKYEINWQDLEEKLANPLTTLMIFCNPHNPTGIVWKKNEVKR
IASLCQENHVILLSDEIHGDLVRNNVKYTPAFSIAKPLRSNVISLVSPSKTFNVAALHAA
TVIIPDNNLRDIVNRGLNSDELAEPNLLAIPATIAAYTEGFNWLHELLAVIDNNFAYAEK
KITKQLKDIKIVSGPATYLMWLDVSEISQNSQELADYIRRETGLIVSPGSIYRGNGKNFL
RLNLASPISMVKDGINRLITGIKKYSKK
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
ttggattatgattttacaaccgtgataaatcggcgacatacagattcagttaagtggaat
gttaaagatagtgaattaccaatgtcgattgcggacatggattttaaaacagcacctgag
attgttttagcaatgcgtgaaaaacttgaactaggtgcctttggctatgaagaagccgga
gccgattattttaatgcagtaagtcattggtatcaattagagcatggtgcagatgctgat
ccagactggatgatttttgctactggagttgtgccagccatttcgtcaattgttagacgt
gtttctcatataggtgataatgtattagtgcaagagccagtttacaatattttttataat
tctattgaaaataacggtcggcatgtattatcaagtgatttaatttatagtaatgggaag
tatgaaattaactggcaagatctagaagaaaagctggctaatcctttaactactttgatg
attttctgtaatccgcacaatcctacaggaattgtatggaaaaagaacgaagtgaaaaga
attgcttctttatgtcaagaaaatcatgtaattcttctgtctgatgagattcatggggat
ttagtgcgtaataacgtcaaatatacacctgctttttctattgctaaacccttaagaagc
aatgtaattagtttagtatctccaagtaaaacttttaatgttgccgcccttcatgccgca
actgtgattattcctgataataatttacgtgatatcgttaatcgtggattaaatagcgat
gaactagctgaacctaatcttttagctattccagcgacaattgctgcttatacggaaggg
tttaattggttgcatgagttattagcggtaattgacaataattttgcttatgctgaaaag
aaaataactaaacagttaaaagatataaaaattgtttctggtcctgcaacttatttaatg
tggttagatgtgagtgaaatctcacaaaatagtcaagaactagctgattatattagaaga
gaaactggtttaattgtttcaccaggtagcatttatcgtggtaatggtaaaaacttttta
aggttgaatcttgcatccccaatttcaatggtaaaagatgggattaatcgattaattact
ggaattaaaaaatattcaaaaaaatag
DBGET
integrated database retrieval system
