Lolium rigidum (rigid ryegrass): 124653654
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Entry
124653654 CDS
T09103
Name
(RefSeq) transcription factor PHYTOCHROME INTERACTING FACTOR-LIKE 13-like
KO
K16189
phytochrome-interacting factor
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
124653654
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lrd03000
]
124653654
Transcription factors [BR:
lrd03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
124653654
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Gene cluster
GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_NPAS4
Motif
Other DBs
NCBI-GeneID:
124653654
NCBI-ProteinID:
XP_047048680
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All DBs
Position
5:19728899..19730373
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AA seq
231 aa
AA seq
DB search
MDQFVPADWNWSTNNGDALAPSSAQDDGLVELLWSNSNVVMHNQPPPPSVRGLEAAFVDD
DSSPEMELFSEILCQTPADAGRSSTGKRKQRDAAGSPSEVTRDVESESHAETKCQPEPSS
GKRRRAAQVHNLSERMRRDRINEKMRALQELIPHCNKTDKASMLDEAIDYLKSLQLRVQM
MWTTGGGMPASAPPMFPASGAHRYMQRMASMRSRMPQFRTNVYSNLIGDDR
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atggaccagttcgtccctgctgattggaattggagcaccaacaatggagacgccctcgcg
ccgtcgtccgcccaagacgacggcctcgtcgagctgctgtggtccaacagcaacgtcgtc
atgcacaaccagccgccgccgccgtcggtgcgggggctggaggcggccttcgtagacgac
gacagctcacccgagatggagctcttctcggaaatcttatgccaaacgccggcagacgcc
ggccgcagcagcacaggcaagcggaagcagagagacgccgccgggagccccagcgaggtt
acgcgggacgtggagtccgagtcccatgccgagactaagtgccagccggagccgtcgtcg
ggcaaacggcggcgcgccgcccaagtgcacaacctctcggagaggatgaggagggacagg
atcaacgagaagatgagggctctgcaagaactcattccccactgcaacaaaacggacaag
gcgtcgatgctggacgaggcgatcgactacctcaagtcgctgcagctgcgggtacagatg
atgtggacgactggtggcggcatgccggcgtcggcgcctccgatgttcccggctagcggc
gcccatcggtacatgcagcggatggcctccatgcgttccaggatgccgcagttcaggact
aacgtatacagtaatttgataggtgatgataggtga
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