Lolium rigidum (rigid ryegrass): 124658104
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Entry
124658104 CDS
T09103
Name
(RefSeq) transcription factor PHYTOCHROME INTERACTING FACTOR-LIKE 13-like
KO
K16189
phytochrome-interacting factor
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
124658104
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lrd03000
]
124658104
Transcription factors [BR:
lrd03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
124658104
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GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_NPAS4
Motif
Other DBs
NCBI-GeneID:
124658104
NCBI-ProteinID:
XP_047052496
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Position
5:156778580..156779667
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AA seq
231 aa
AA seq
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MDQFVPADWTWSTNNGDAFEPSCAQDDGLVELLWSNSNVQWRSQPPPLSVRGLEAAFVDD
DSSPEMELFSEIFCQTPADAGRSSTGKRKQRDAAGSPSEVKRDVESDSAADTKCQPEPST
GKRRRAAQVHNLSERMRRDRINEKMRALQELIPHCNKTDKASMLDEAIDYLKSLQLRVQM
MWTTGGGMPASAPPMFPASGAHRYMQRMASMRSRMPPFRTNVYSNSNGTKS
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atggaccagttcgtccctgctgattggacctggagcaccaacaatggagacgcctttgag
ccatcgtgcgcccaagacgacggcctcgtcgagctgctgtggtccaacagcaacgtccag
tggcggagccagccgccgccgctgtcggtgcgggggctcgaggcggccttcgtagacgat
gacagctcacccgagatggagctcttctcggagatcttctgccaaacgccggcagacgcc
ggccgcagcagtacaggcaagcggaagcagagagacgccgccgggagccccagcgaggtt
aagcgggacgtggagtccgattccgctgccgacactaagtgccagccggagccgtcgacg
ggcaaacggcggcgcgccgcccaagtgcacaacctctcggagaggatgaggagggacagg
atcaacgagaagatgagggctctgcaagaactcattccccactgcaacaaaacggacaag
gcgtcgatgctggacgaggcgatcgactacctcaagtcgctgcagctgcgggtacagatg
atgtggacgactggtggcggcatgccggcgtcggcgcctccgatgttcccggcgagcggc
gcccatcggtacatgcagcggatggcctccatgcgttccaggatgccgccgttcaggact
aatgtatacagtaattcaaatggcacaaaaagttga
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