KEGG   Lolium rigidum (rigid ryegrass): 124666909
Entry
124666909         CDS       T09103                                 
Name
(RefSeq) RING-box protein 1a-like
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
lrd  Lolium rigidum (rigid ryegrass)
Pathway
lrd03420  Nucleotide excision repair
lrd04120  Ubiquitin mediated proteolysis
lrd04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:lrd00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    124666909
   04120 Ubiquitin mediated proteolysis
    124666909
  09124 Replication and repair
   03420 Nucleotide excision repair
    124666909
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:lrd04121]
    124666909
   03400 DNA repair and recombination proteins [BR:lrd03400]
    124666909
Enzymes [BR:lrd01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     124666909
Ubiquitin system [BR:lrd04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   124666909
  Multi subunit type E3
   SCF complex
    Ring finger protein
     124666909
   Cul2 complex
     124666909
   Cul3 complex
     124666909
   Cul4 complex
     124666909
   Cul7 complex
     124666909
   Cul8 complex
     124666909
   Cul9 complex
     124666909
DNA repair and recombination proteins [BR:lrd03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      124666909
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      124666909
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11 zf-RING_16
Other DBs
NCBI-GeneID: 124666909
NCBI-ProteinID: XP_047060197
LinkDB
Position
6:complement(314361605..314364278)
AA seq 125 aa
MSAMETDAPDVKPPVAPAPAAEGSSAAGPSSSRKPTKRFEIKKWNAVALWAWDIVVDNCA
ICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEF
QKYGH
NT seq 378 nt   +upstreamnt  +downstreamnt
atgtccgccatggagaccgacgcccccgacgtgaagccgccggtcgcccccgcccccgcc
gccgagggctcctccgccgccgggccctcctcctcccgcaagcccaccaagcgcttcgag
atcaagaagtggaacgccgtcgccctctgggcgtgggatatcgtggtcgacaactgcgcc
atctgccgcaaccacatcatggatctatgcatcgagtgccaggcgaaccaggccagcgcc
accagcgaggagtgcaccgtcgcgtggggtgtctgcaatcatgctttccacttccactgc
atcagcaggtggctcaagactcgccaagtgtgcccattagacaacagcgaatgggaattc
cagaaatatggccactag

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