Lolium rigidum (rigid ryegrass): 124666909
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Entry
124666909 CDS
T09103
Name
(RefSeq) RING-box protein 1a-like
KO
K03868
E3 ubiquitin-protein ligase RBX1 [EC:
2.3.2.32
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03420
Nucleotide excision repair
lrd04120
Ubiquitin mediated proteolysis
lrd04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
124666909
04120 Ubiquitin mediated proteolysis
124666909
09124 Replication and repair
03420 Nucleotide excision repair
124666909
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lrd04121
]
124666909
03400 DNA repair and recombination proteins [BR:
lrd03400
]
124666909
Enzymes [BR:
lrd01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.32 cullin-RING-type E3 NEDD8 transferase
124666909
Ubiquitin system [BR:
lrd04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
124666909
Multi subunit type E3
SCF complex
Ring finger protein
124666909
Cul2 complex
124666909
Cul3 complex
124666909
Cul4 complex
124666909
Cul7 complex
124666909
Cul8 complex
124666909
Cul9 complex
124666909
DNA repair and recombination proteins [BR:
lrd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
124666909
TCR (transcription coupled repair) factors
Cul4-CSA complex
124666909
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-rbx1
zf-ANAPC11
zf-RING_2
zf-C3HC4
zf-C3HC4_2
zf-RING_11
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
124666909
NCBI-ProteinID:
XP_047060197
LinkDB
All DBs
Position
6:complement(314361605..314364278)
Genome browser
AA seq
125 aa
AA seq
DB search
MSAMETDAPDVKPPVAPAPAAEGSSAAGPSSSRKPTKRFEIKKWNAVALWAWDIVVDNCA
ICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEF
QKYGH
NT seq
378 nt
NT seq
+upstream
nt +downstream
nt
atgtccgccatggagaccgacgcccccgacgtgaagccgccggtcgcccccgcccccgcc
gccgagggctcctccgccgccgggccctcctcctcccgcaagcccaccaagcgcttcgag
atcaagaagtggaacgccgtcgccctctgggcgtgggatatcgtggtcgacaactgcgcc
atctgccgcaaccacatcatggatctatgcatcgagtgccaggcgaaccaggccagcgcc
accagcgaggagtgcaccgtcgcgtggggtgtctgcaatcatgctttccacttccactgc
atcagcaggtggctcaagactcgccaagtgtgcccattagacaacagcgaatgggaattc
cagaaatatggccactag
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