Lolium rigidum (rigid ryegrass): 124672396
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Entry
124672396 CDS
T09103
Name
(RefSeq) transcription factor PHYTOCHROME INTERACTING FACTOR-LIKE 13-like
KO
K16189
phytochrome-interacting factor
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
124672396
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lrd03000
]
124672396
Transcription factors [BR:
lrd03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
124672396
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GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
Motif
Other DBs
NCBI-GeneID:
124672396
NCBI-ProteinID:
XP_047064588
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Position
7:complement(189494816..>189497980)
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AA seq
290 aa
AA seq
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GGRDLYSQLWHGIADADAHGDASALVTGGGAGSSFCGSNAVTAPALLPFPEEEPASSSAG
GHAVLLKRGRDELDSRGEEADECEAIDETRPSKRPSAKRRTRAADVHNQSERRRRDRINE
KMKALQELVPHCNKSDKASILDDAIEYLKSLQLQVQIMWMTTGMAPMMFPGAHQLMPPMA
MGLSTGCMPAAQSLSQLQRVAPFMNNPLPNQVPQVQSPATNSLSVTNQMQNNGICAPRNP
FLHPNDTIAAAAQVPGMFRYGSQPMQHNEANELLASTATPASGAGPSCSS
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
ggcggcagggacctgtactctcagctctggcacggcatcgccgacgccgacgcccacggg
gacgcgagcgcgctcgtgacggggggcggcgccgggtcgagcttctgcgggagcaacgcg
gtgacggctccggcgctgctgccgtttccggaggaggagcctgcctcgtcctcggcgggc
ggccacgcagtgctgctcaagagggggagggacgagctggatagccgcggcgaggaggcc
gatgaatgtgaggccattgacgagacccggccgtcaaagcgaccgtcggcgaagcgcagg
actcgcgccgccgacgtccataaccagtccgagaggagaagaagggataggatcaacgag
aagatgaaggcattgcaagaactcgtgcctcactgcaacaagagcgacaaggcatcgata
ctagacgacgcaatcgagtacttgaagtccctacaattgcaagttcagatcatgtggatg
acaactgggatggcgccgatgatgttccctggtgctcaccaactcatgccgccgatggcc
atgggcttgagtacgggatgcatgcctgcggcccaaagcctgagccagctacaaagagta
gcaccgttcatgaacaatcctcttccaaatcaagtgccccaggtccagtctccagctacc
aattccctcagcgtaacaaaccagatgcaaaacaatggcatctgcgcgccaagaaatcct
ttcctgcatcctaacgacacaatagcagcagcagctcaggtgccgggtatgttccgctat
ggatctcaacctatgcaacacaacgaagctaatgagctactggctagcactgctactcca
gcttcaggagctggtccgtcgtgttcctcttaa
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