Lolium rigidum (rigid ryegrass): 124675673
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Entry
124675673 CDS
T09103
Name
(RefSeq) ATP-dependent helicase rhp16
KO
K15083
DNA repair protein RAD16
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lrd03400
]
124675673
DNA repair and recombination proteins [BR:
lrd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NER4 complex
124675673
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_5
zf-RING_UBOX
zf-RING_2
ResIII
zf-C3HC4_4
RING_XB3-XBAT31
Prok-RING_4
zf-Nse
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
124675673
NCBI-ProteinID:
XP_047067702
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Position
7:246669397..246678369
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AA seq
848 aa
AA seq
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MPRRTGNASGEGSSRRRRRDDDDDSDHESVPSDNTSDSDFVADTEDEAGDDDDDFASDQD
VAPAPAPAAVPVVVAAPLSLVLPPRPRKEKRRAKKKRKGEADEDGPRLPWKEWEEANAKW
LDARDEAAAAAAAPDDSAPTALPTAEAAPEVLLSLLRFQKEWLAWALAQEASVSRGGILA
DEMGMGKTIQGIALVLTARALRAPPSPSHAPTMRRVGCTLVLCPNVAVIQWVQEIEKHTA
KGSVRVLQYTGAKRAISKPDFNKYDFVVTTYNTLEADYRRHIMPPKIRCQYCNKLFYPDK
MKVHLTYFCGPDALRTEKQAKQKSKSWGDKKRVRKGKKSGGVDDEDDLEELEELSTQSRG
KSPLHVVRWERIILDEAHNIKDRRCNTARAVFALESEYKWALSGTPLQNRVGELYSLIRF
LQIFPYSNYFCKDCDCEILDTQMKKKCDCGHSSVRHFCWWNKYIATPILHGSASFEGRRA
MTLLKEKVLKGIVLRRTKIGRAADLALPTKTVTLRRDSFDKNEMEFYEALYTQSCTQFDS
YVVAGTLLNNYAHIFDLLTRLRQAVDHPYLVAYSQTAVLREECKKEGNGATEMQCGICDD
LAKDFVVTSCDHVFCKTCLLDYAATLENVTCPTCSIPITVDFTTESSREKVPANMKGSKR
SGILGRLQSLADFKTSTKIDALREEIRNMIERDGSAKGIVFSQFTSFLDLIEFSLQRSGI
KCVQLNGRMNLVEKGRAIDTFINDPDCRIFLMSLKAGGVALNLTVASHVFLMDPWWNPAV
ESQAQDRIHRIGQFKPIRSMRFVIKDTVEERILQLQEKKQLVFDGTVGDCQEAMAKLTEA
DLKFLFQN
NT seq
2547 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgccgaaccgggaatgcatccggtgaaggcagcagtcgtcgccgccgacgcgat
gacgacgacgactcggaccacgagagcgtcccctccgacaacacatccgactccgacttc
gtcgccgacacggaggacgaggcgggggacgacgacgacgatttcgcctccgaccaagac
gtcgcccccgcgcccgcgcccgcggcggttcccgtggtggtggcggcgcctctctcgctg
gtgctgccgccgcggccgcgcaaggagaagcggagggcgaagaagaagcggaagggggag
gccgacgaggacggcccgcgcctgccgtggaaggagtgggaggaggccaacgccaagtgg
ctcgacgcgcgcgacgaggcggcggcggcggcggcggcgcccgacgactccgctcccacc
gcgctgcccaccgcggaggcggcccccgaggtgctgctcagcctgctgcgcttccagaag
gagtggctggcctgggcgctggcgcaggaggcctcggtctcgcgcggcggcatcctcgcc
gacgagatggggatgggcaagaccatccagggcatcgcgctcgtcctcaccgcgcgcgcg
ctccgcgccccgccctcgccctcacacgcccccacgatgcgacgggtcgggtgcacgctg
gtcctctgccccaacgtggccgtcatccagtgggtgcaggagatcgagaaacacacggct
aagggcagcgtgcgcgtgctgcagtacaccggcgccaagcgggccatttccaagcctgat
ttcaacaaatacgacttcgtcgtcactacatacaacaccctagaggccgactaccggagg
cacatcatgccacctaagattcggtgccaatactgcaacaaactcttttaccccgacaag
atgaaggttcacttgacatacttctgcggacctgatgccctgcgtactgagaagcaggcc
aagcagaagagcaaaagctggggtgacaagaaacgggtgaggaaggggaaaaaatcgggt
ggtgtcgacgacgaggacgatcttgaggaattggaagaattgagcacccaatctaggggc
aagtcccctctgcacgttgtgcggtgggagcggattatcttggatgaggctcacaatata
aaagatagacgatgcaatactgcaagggcagtttttgctttggagtcggaatacaagtgg
gctctgagtgggacaccattgcagaatcgcgttggagaactttactcactgattcgcttc
ttgcaaatctttccctactcgaactatttctgcaaggactgtgactgtgagatactagat
acccaaatgaagaaaaaatgtgactgtggtcactcatcagtcaggcacttttgctggtgg
aataagtacatagcgacaccgatactacatgggtcagcgagttttgagggccgcagagcc
atgactcttctcaaggaaaaagtcttgaagggcatagtgttaaggcggacgaaaataggc
cgagctgcagatcttgctcttccgacaaagactgtgacactgaggcgggactcttttgat
aaaaatgaaatggaattttatgaagcattgtatactcaaagctgcacacagtttgattcg
tatgttgtcgctggaacgctgcttaacaactatgctcacatctttgacctcctcacaagg
ctgagacaggctgtagatcatccataccttgtcgcatattctcagacagcagtacttcgt
gaagaatgcaaaaaagaaggaaatggtgccacggaaatgcagtgtggaatatgtgatgat
ttggcaaaagatttcgtggttacgtcttgtgatcatgtattctgcaagacttgtttgttg
gactacgctgcaactttggagaatgttacatgtccaacttgttcaatacccattactgtt
gactttacaactgaaagctcgagagaaaaggtccctgcaaatatgaagggtagcaaacgc
tcaggcatattaggcagactacaaagcctagcagatttcaagacgagtacaaaaattgat
gccttgagagaagagataagaaacatgattgagcgtgatggttcggcaaaagggattgtg
tttagccagttcacctcattcttggatttgattgaattctccctgcagaggtctggcatc
aagtgcgtgcaactaaatgggaggatgaacttggttgaaaagggcagagctatagacacc
ttcataaatgacccagattgcaggattttcctgatgagcctgaaagctggaggagtagct
ctaaatcttaccgtagcatctcatgttttcttgatggacccttggtggaacccggcagtc
gagagccaagcgcaagatcggatccaccgaattggacaattcaagcctatcagaagcatg
aggtttgtgatcaaggacacggttgaagagcgcatcctgcaattgcaagagaagaagcaa
cttgtgttcgatggcactgtgggtgactgtcaggaggccatggcaaagcttacagaggct
gacctgaagttcctgttccagaactaa
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