Lolium rigidum (rigid ryegrass): 124688142
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Entry
124688142 CDS
T09103
Name
(RefSeq) RING-box protein 1-like
KO
K03868
E3 ubiquitin-protein ligase RBX1 [EC:
2.3.2.32
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03420
Nucleotide excision repair
lrd04120
Ubiquitin mediated proteolysis
lrd04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
124688142
04120 Ubiquitin mediated proteolysis
124688142
09124 Replication and repair
03420 Nucleotide excision repair
124688142
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lrd04121
]
124688142
03400 DNA repair and recombination proteins [BR:
lrd03400
]
124688142
Enzymes [BR:
lrd01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.32 cullin-RING-type E3 NEDD8 transferase
124688142
Ubiquitin system [BR:
lrd04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
124688142
Multi subunit type E3
SCF complex
Ring finger protein
124688142
Cul2 complex
124688142
Cul3 complex
124688142
Cul4 complex
124688142
Cul7 complex
124688142
Cul8 complex
124688142
Cul9 complex
124688142
DNA repair and recombination proteins [BR:
lrd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
124688142
TCR (transcription coupled repair) factors
Cul4-CSA complex
124688142
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-rbx1
zf-ANAPC11
zf-RING_2
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
124688142
NCBI-ProteinID:
XP_047077813
LinkDB
All DBs
Position
2:217695571..217699676
Genome browser
AA seq
116 aa
AA seq
DB search
MDQGDVAVAVPAAVPSPSCAGAGCKKNKRLEIKKWNAVALWAWDIVVDNCAICRNHIMDL
CIECQANQASVTSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
NT seq
351 nt
NT seq
+upstream
nt +downstream
nt
atggaccagggcgacgtcgccgtggccgtgcccgccgcagtgccctccccgtcctgcgcc
ggcgccggctgcaagaagaacaagcgcctcgagatcaagaagtggaacgccgtcgcgctc
tgggcctgggacatcgtggtcgacaactgcgccatctgccgcaaccacatcatggacctc
tgcatcgagtgccaggcgaaccaggccagcgttaccagcgaggagtgcaccgtcgcttgg
ggagtttgcaaccacgccttccacttccactgcatcagccgttggctcaagacccgtcaa
gtgtgccctctagacaacagcgagtgggagttccagaagtatggtcactaa
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