Lolium rigidum (rigid ryegrass): 124702133
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Entry
124702133 CDS
T09103
Name
(RefSeq) protein SIEL-like
KO
K13141
integrator complex subunit 4
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lrd03041
]
124702133
Spliceosome [BR:
lrd03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
124702133
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Gene cluster
GFIT
Motif
Pfam:
HEAT
HEAT_2
PDS5
HEAT_MROH2B_C
HEAT_GCN1_C
HEAT_EZ
INTS4_C
Cnd1
Cnd3
TPR_DNAAF5
SCD
CEP104-like_TOG
TPR_TAF2_C
Adaptin_N
VPS15-like_hel
API5
Motif
Other DBs
NCBI-GeneID:
124702133
NCBI-ProteinID:
XP_047090198
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All DBs
Position
3:complement(108307858..108312390)
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AA seq
799 aa
AA seq
DB search
MDMDEDLPASEPCSTFAKLASFTGPSASTSSYAGPEVEVRALASMATALYPLARAEGLRG
LAAVLEKGNAGREVAEYCYSCAAALLRDEDEGIRLGAVQLAGICVEKIAMREELSGDADQ
IDLIFLQLSSMARDMCAKVRIEAFNALAKMQRVSDGVLLQSLSKKMIKTDTGSATGKKVS
PKLIFPCAAGIFAHGIEDEFYQVRAAACKALGELAKFSNQYAQKALDLLMDMMNDDTEAV
RLQTLRTLLDMATYGHLSVQEKHMHMFLGILMDANVIVRNAARKILGLVKLPKLQMFKSA
LDGLIAGLEKDPEDQEIYGVLFSIGKNHGSFSVNIAKHLAKEISMASDGELILDKPRIKA
LLIVSILAPCSVDKEKELDIPAVIFSHAIPLLGTISCALGEDTQDSLLSHLFHRCGLPFW
GKRLVSSEGKDSECFSVETADGTHAQIEKTAMSTNCLDEVVIMQSVRLILETVQGAWAMR
KSCIIGEVQSTLRTCKEEVNILAVNSSGSAYGFLSFVSDYIDAVQLIVEMWHFVQSENSY
AFGPTSQDILLEKLDTSVRRMKCCYVGLHRELEVQVLELALLAILFRLSELAICSELVLD
NLHWIINHLDGLCADGSYELSDFSQEVKKSFDANCIDCNPAVNICSFLEIFDLKPATSFG
MVNARSAVLKVCDTDTENPLSCVRGLPVGVSFDVSLQNIASHDRIWLRMIAGESIQHVFL
DLSCFGGDDKVKSCSTVIPFYATPMACSFVLRACLVIECPFGSIGDHQEGHGGPRDCVVQ
LCDELDVYFVSADMSKGGG
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atggacatggacgaagacctaccagcgtccgaaccatgctcaactttcgccaaacttgct
agtttcacagggccgtccgcgtcaaccagctcgtacgccggcccagaggtggaggtccga
gcgctcgcctcgatggccaccgcgctctacccgctggcacgggcggaggggctccgtggc
cttgctgcggtcctcgagaaggggaatgccggtagggaagttgcggagtactgctacagc
tgtgcggcggcattgctgagggatgaggacgagggtatcaggctgggcgccgtgcaattg
gctggcatttgtgtggagaagattgctatgagagaggaattgagtggtgatgctgaccaa
atcgacctgattttcctacagcttagctccatggctagggacatgtgtgcaaaagtaaga
attgaagcattcaacgcacttgccaaaatgcagagagtatccgatggcgtgttgcttcag
tccttgtctaagaagatgataaaaactgacaccggaagtgccacagggaaaaaagtatca
cctaaattaatatttccctgtgctgctggcatatttgcacatgggattgaagatgaattt
tatcaggtgagagcagctgcctgtaaagctttgggagaacttgcaaagttttcaaaccaa
tatgcacaaaaggccttggacctgttgatggacatgatgaatgatgataccgaagcagtt
agactgcaaactttgcggacactactcgatatggcaacatatggacatttgagtgttcag
gagaagcacatgcatatgttccttggcatattgatggatgccaatgttatagtacgaaat
gcagcacgcaagatcctagggttggtgaaactgcctaagcttcagatgtttaaatctgca
cttgatggtctcattgcaggtctggagaaagatccggaggatcaagaaatatatggtgtt
ctgttttccattggcaagaatcatgggagcttttcagtcaatatagctaagcatttagcc
aaagagatcagtatggcatctgatggagagctgatattggacaaacctaggatcaaagca
ttgttaatagtgtctatcttggcaccttgttctgttgataaagaaaaagaactggatata
cctgcagttatattttcacatgcaattcccctacttgggacgatctcgtgtgcactagga
gaagatacacaagattcgctcttatcccacttgtttcatcgatgtggattgccattttgg
ggtaagaggttagtgtcttcagaaggtaaagattctgaatgcttcagtgttgaaactgca
gatggaactcatgcacagatagaaaaaactgcaatgtcaacgaattgcttagatgaagtc
gtgataatgcaatcggtgaggctcatactagaaacagttcaaggcgcctgggctatgagg
aagtcatgcattataggagaagttcaaagtactctgaggacatgcaaagaagaagtcaat
atattagctgtaaattcttcaggatcagcttatgggttcttgagctttgtaagcgactat
attgatgcagtacagctcattgttgaaatgtggcatttcgttcaatcggagaattcttat
gcttttggcccaacatcacaagatattttgctagagaagttggatacatctgtgagaagg
atgaaatgttgttatgtcggattgcatagagaactggaggttcaggtcttggagcttgct
ttgttagctattctatttagactgtctgagctagcaatatgttcagaattagtgttggac
aatctgcattggataattaatcacttagatggtctatgtgccgatggatcatatgagctt
tctgacttcagccaagaagttaagaaatcatttgatgctaactgtattgactgcaatcct
gctgtcaatatttgcagttttcttgaaatctttgatctaaagccagcgaccagttttgga
atggttaatgctagaagtgccgtgttgaaagtatgtgatactgatactgaaaatccgtta
tcatgtgtccgtggattgcctgtgggtgtaagctttgacgtatctcttcaaaatattgct
agccacgatagaatatggctccgcatgattgctggtgagtccatccaacatgtcttctta
gacttgtcttgttttgggggcgatgataaggtgaagagctgctctaccgtcattcctttc
tatgctactccaatggcatgttcatttgttctgagggcatgtttggtaattgagtgtcca
tttggaagcatcggtgatcatcaggaaggacatggaggaccaagagattgtgtagtccaa
ctctgtgatgaattggatgtctactttgttagtgctgatatgagcaaaggcggtggttag
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