Lolium rigidum (rigid ryegrass): 124702292
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Entry
124702292 CDS
T09103
Name
(RefSeq) protein SIEL-like isoform X1
KO
K13141
integrator complex subunit 4
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lrd03041
]
124702292
Spliceosome [BR:
lrd03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
124702292
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
HEAT
HEAT_2
HEAT_EZ
PDS5
Cnd3
Cnd1
CEP104-like_TOG
Adaptin_N
API5
Motif
Other DBs
NCBI-GeneID:
124702292
NCBI-ProteinID:
XP_047090372
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Position
3:complement(126035878..126040564)
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AA seq
799 aa
AA seq
DB search
MDMDEDLPASEPCPTFAKLASFTGPSASTSSYAGPEVEVRALASMATALYPLARAEGLRG
LAAFLEKGNAGSGVAEYCYGYAAELLRDEDEGIRLGAVRLAGICVEKIAMREELSGDADQ
IDLIFLQLSSMARDMCAKVRIEAFNALAKMQRVSDGVLLQSLSKKMIKTDTGSATGKKIS
PKLVFPCAAGIFAHGIEDEFYQVREAACKALGELAKFSNQYAQKALDLLMDMMNDDTEAV
RLQTLRTLLDMATYGHLSVQEKHMHMFLGILMDANIIVRNAARKILGLVKLPKLQMFKSA
LDGLIAGLEKDPEDQEIYGVLFSIGKNHGSFSANIAKHLAKEISMASDGELILDKPRIKA
LLIVSILAPCSVDKEKELDIPAVIFSHAIPLLGTILCALGEDTQDSLLSHLFHRCGLPFW
GKRLVSSEGKDSECFSVETVDGTHAQIEKTAMSTNCLDEVVIMQSTRLILETVQGAWAMR
KSCITGEVQSTLRTCKEEVNILAVNSSGSAYGFLSFVSDYIDAVQLIVEMWRFVQLENSY
AFGPTSQHILLEKLDTSVRRMKCCYVGLHRELEVQVLELALLAILFRLSELAICSELVLD
KLHWIINHLDGLCADGSYELSDFSQEVKKSFDANCIDCNPAVNICSFLEIFDLKPATNFG
MVNARSAVLKVCDTDTENPLSCVRGLPVGVSFDVSLQNIASHDRIWLRMIAGESIQHVFL
DLSCFGGDDKVKSCSTVIPFYATPMACSFVLRACLVIECPFGSIGDHQEGHGGPRDCVVQ
LCDELDVYFVSADMSKGGG
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atggacatggacgaagacctaccagcgtccgaaccatgcccgactttcgccaagcttgct
agtttcacggggccgtccgcgtcaaccagctcgtacgccggcccagaggtggaggtccga
gcgctcgcctcgatggccaccgcgctctacccgttggcacgggcggaggggctccgtggc
cttgctgccttcctcgagaaggggaatgccggtagtggagttgcggagtactgctacggc
tatgcggcggaattgctgagggatgaggacgagggtatcaggctgggcgccgtgcgattg
gctggcatttgtgtggagaagattgctatgagagaggaattgagtggtgatgctgaccaa
atagacctgattttcctacagcttagctccatggctagggacatgtgtgcaaaagtaaga
attgaagcattcaacgcacttgccaaaatgcagagagtatccgatggtgtgttgcttcag
tccttgtctaagaagatgataaaaactgacaccggaagtgccacagggaaaaaaatatca
cctaaattagtatttccctgtgctgctggcatatttgcacatgggattgaagatgaattt
tatcaggtgagagaagctgcctgtaaagctttgggagaacttgcaaagttttcaaaccaa
tatgcacagaaggccttggacctgttgatggacatgatgaatgatgatacagaagcagtt
agactgcaaactttgcggacactactcgatatggcaacatatggacatttgagtgtccag
gagaagcacatgcatatgttccttggcatattgatggatgccaatattatagtacgaaat
gcagcacgcaagatcctagggttggtgaaactgcctaagcttcagatgtttaaatctgca
cttgatggtctcattgcaggtctggagaaagatccggaggatcaagaaatatatggtgtt
ctgttttccattggcaagaatcatgggagcttttcagccaatatagctaagcatttagcc
aaagagatcagtatggcatctgatggagagctgatattggacaaacctaggatcaaagca
ttgttaatagtgtctatcttggcaccttgttctgttgataaagaaaaagaactggatata
cctgcagttatattttcacatgcaattcccctacttgggacgatcttgtgtgcactagga
gaagatacacaagattcgctcttatcccacttgtttcatcgatgtggattgccattttgg
ggtaagaggttagtgtcttcagaaggtaaagattctgaatgcttcagtgttgaaactgtg
gatggaactcatgcacagatagaaaagactgcaatgtcaacgaattgcttagatgaagtc
gtgataatgcaatcgacgaggctcatactagaaacagttcaaggcgcctgggctatgagg
aagtcatgcattacaggagaagttcaaagtactctgaggacatgcaaagaagaagtcaat
atattagctgtaaattcttcaggatcagcttatgggttcttgagctttgtaagcgactat
attgatgcagtacagctcattgttgaaatgtggcgtttcgttcaattggagaattcttat
gcttttggcccaacatcacaacatattttgctagagaagttggatacatctgtgagaagg
atgaaatgttgttatgtcggattgcatagagaactggaggttcaggtcttggagcttgct
ttgttggctattctatttagactgtctgagctagcaatatgttcagaattagtgttggac
aagctgcattggataattaatcacttagatggtctatgtgccgatggatcatatgagctt
tctgacttcagccaagaagttaagaaatcatttgatgctaactgtattgactgcaatcct
gctgtcaatatttgcagttttcttgaaatctttgatctaaagccagcaaccaattttgga
atggttaatgctagaagtgccgtgttgaaagtatgtgatactgatactgaaaatccatta
tcatgtgtccgtggattgcctgtgggtgtaagctttgacgtatctcttcaaaatatcgct
agccacgatagaatatggctccgcatgattgctggtgagtccatccaacatgtcttctta
gacttgtcttgttttgggggcgatgataaggtgaagagctgctctactgtcattcctttc
tatgctactccaatggcatgttcatttgttctgagggcatgtttggtaattgaatgtcca
tttggaagcatcggcgatcatcaggaaggacatggaggaccaagagattgtgtagtccaa
ctctgtgatgaattggatgtctactttgttagtgctgatatgagcaaaggcggtggttag
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