KEGG   Lolium rigidum (rigid ryegrass): 124704533
Entry
124704533         CDS       T09103                                 
Name
(RefSeq) switch 2-like
  KO
K20098  DNA excision repair protein ERCC-6-like 2 [EC:5.6.2.-]
Organism
lrd  Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:lrd00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lrd03400]
    124704533
DNA repair and recombination proteins [BR:lrd03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   Helicases
    124704533
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C DEAD ResIII HDA2-3 SWI2_SNF2 ERCC3_RAD25_C
Other DBs
NCBI-GeneID: 124704533
NCBI-ProteinID: XP_047092759
LinkDB
Position
3:complement(392458660..392467225)
AA seq 867 aa
MALNRFKEALLPCSSSTATPSQPRPRSPSPPLPTRRPPKTSLSQQLLRLEATCSFPAPQS
SPPKPPSHKVAEDAAELPTSSEEEDVAPRVRRRPAPPPAAALEPRGPYEPLVLSPPGEQP
VVQVPPSINCRLLAHQRDGVRFLYNLYRNNHGGVLGDDMGLGKTIQTIAFLSSVIGKDND
HGEKLADNGKKTGPVLILCPTSVIRNWENEFSEWASFSVAVYHGPNRDLVLEKIEGQGLE
VLITSFDTFRTRDKVLSDIPWELVVVDEAHRLKNDKSKLYTACLGITTQKRFGLTGTIMQ
NKIMELFNVFDWAAPGCLGDREHFREYYDEPLKHGQRLSAPERFVQVADKRKKHLVSVLR
KFLLRRTKEETIGHLMLGKEDNIVFCRMSDVQKRVYRRMLQQPDIQILVNKDLPCSCGSP
LTQVECCKKIEPNGIIWSYLHRDNLDGCPLCPFCLVLPCLVKLQQISNHLELIKPNPRDE
IEKQKKDAELAAAVFDTDIELVGGSAKSENFMGLSDSEHCGKMRALERLMVLWTLEGDKI
LLFSYSVRMLDILEKFLIRKGYCFSRLDGSTPMNARQSLVDEFNKSPSKQVFLISTRAGS
LGVNLVSANRVVIFDPSWNPAQDLQAQDRSFRYGQKRHVTVFRLLGAGSLEELIYSRQIY
KQQLSNIAVSGTIEKRYFNGVQDDKKFQGELFGICNLFRDLSDKLFTSEIIEMHGEHEKD
KTSEATGIREIVDTDLFGTQEKMKSPTAAIGDENQTLADCGIVYAHRNEDVVNTRTQEHS
EKDDGATEECVQILSEGLQSKKQIKPTTRANFCSVEEQKRKEFSRVASSVGMNDLEFSKW
LLSVSPLQRQQVLDNHRKKRSSIIKRK
NT seq 2604 nt   +upstreamnt  +downstreamnt
atggccctcaaccgcttcaaggaagccctcctcccatgctcctcctccacggccacgccc
agccaacctcggcctcgatcgccgtcgcctcctctcccaacgcggcggcctcccaagacc
tccctctcgcagcagctcctccgcctcgaggccacctgctcctttcccgccccccaatcg
tcccctcccaaacccccgagccacaaggtagcggaggatgcggcggaactgccgacttcc
tcggaggaggaggacgtggctcctcgcgtccggcgccgtccggccccgccaccagcggcc
gcccttgagccccgcgggccctacgagccactcgtgctctcgccgcccggagagcaaccc
gttgtccaggttcccccatcaattaattgcaggctacttgcacaccagagggatggcgtg
agattcttatacaatctgtatagaaacaaccatggtggcgtgcttggagatgacatgggt
ttgggaaagactattcaaacaatagcttttctgtcctctgttattggaaaagataatgac
catggcgagaaattagcagacaatggaaagaagactggtcctgtactcatcctctgtccc
acttctgtaattcgaaattgggaaaatgaattttctgagtgggccagtttttctgttgct
gtctatcatggtccaaatcgtgacttagttcttgaaaaaattgaaggtcaaggactagag
gtgctcattaccagttttgatacttttagaactcgtgacaaggttttaagcgacatccca
tgggaacttgtggtagttgatgaggcccaccgtctcaagaatgacaaatcgaagttatat
acagcttgcttgggaattactacacaaaaacgcttcggtctcactggaaccataatgcag
aataagataatggaattatttaatgtgtttgactgggccgcacctggttgtttgggggac
cgagaacactttagagaatattatgatgaacccttaaaacatggccagagattaagtgct
cctgagagatttgttcaagttgctgataagcgcaagaagcaccttgtctctgttctgagg
aaattcctgttgagaagaacaaaagaggagactattggacatctcatgcttgggaaggaa
gataatattgttttctgcagaatgagtgatgttcaaaagcgtgtttacagaagaatgctg
caacagcctgacatacaaatccttgtaaataaagatctcccctgtagctgcggaagtcct
ctgactcaggttgagtgttgcaagaaaattgaaccaaatggcattatctggtcctatctc
cacagagataatctggacggctgtcctctatgccccttctgccttgttcttccttgcctt
gtcaagcttcagcagattagtaaccatctggaattgataaagcccaatccaagggacgag
atcgaaaagcagaagaaagacgctgagcttgcggctgctgtgtttgatacagatattgaa
ttagttggcggtagtgctaaaagtgaaaacttcatgggtctcagcgactcagaacactgt
ggaaagatgcgtgcactggaaagacttatggttctatggactctagagggtgacaagatt
cttcttttcagctattctgtcaggatgcttgacatactagagaagtttcttataaggaag
ggttattgcttttctcgcttggatggatcaacccccatgaatgcacgccagtcgctcgtt
gatgagttcaacaaaagccctagcaaacaggttttccttatatctactcgggcaggcagt
ttaggtgttaaccttgtgagtgctaaccgtgtggtgatatttgatcctagttggaatcct
gctcaagacttgcaagcacaagacagatcctttcgatatggacagaaacggcatgtcaca
gtatttcgcctacttggagctggttcactagaagaactcatttattctcgacagatatat
aaacagcagctttctaacattgcagtctcagggacaatagaaaagcgttactttaacggt
gtgcaggatgataagaaatttcaaggtgagctctttgggatctgcaatctgttccgtgac
ttgtctgataagcttttcactagtgagattattgagatgcatggagaacatgagaaagat
aaaacatctgaagcgacagggataagagaaatagtcgacactgatttatttggcacacaa
gagaaaatgaaatctcccacagcagcaataggtgatgaaaatcagacattggctgactgt
ggaatagtgtatgctcaccggaacgaggatgttgtcaacacgaggacacaggaacacagc
gaaaaagatgacggtgctactgaagaatgtgtacagatcctctccgagggcctgcagagt
aagaagcaaataaagcccacgaccagggcgaacttttgctcagtggaggaacagaaacgg
aaggagttcagccgcgttgcatcttctgttggtatgaacgaccttgagttcagcaagtgg
ttgctatccgtctcacctctgcagcggcagcaagtactggacaatcataggaagaaaagg
agtagtataatcaagcgtaaatga

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