Lacticaseibacillus rhamnosus GG: LGG_01489
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Entry
LGG_01489 CDS
T00987
Symbol
nth
Name
(GenBank) Endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
lrh
Lacticaseibacillus rhamnosus GG
Pathway
lrh03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lrh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LGG_01489 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lrh03400
]
LGG_01489 (nth)
Enzymes [BR:
lrh01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
LGG_01489 (nth)
DNA repair and recombination proteins [BR:
lrh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LGG_01489 (nth)
Prokaryotic type
LGG_01489 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
HHH_5
RecR_HhH
HHH_8
IMS_HHH
Motif
Other DBs
NCBI-ProteinID:
CAR87384
UniProt:
A0A7S7FQ42
LinkDB
All DBs
Position
complement(1494158..1494808)
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AA seq
216 aa
AA seq
DB search
MTDSEARQLFEQIMALYPDPQPTLHAQNPFQILVAVMLSAQTTDVAVNAVTPELFAAYPT
PAAMAAASVTDIAKKISRLGLYRTKAAHLKALSAILVEKYDGQVPANAADLVKLPGVGKK
TATVVLSDAFGIPGVAVDTHVSRIVKGLGLVSPKATPVQIQSRLETLMPKSTWIKLHRSL
IRFGREHLRARDPQPPSGPEWTFLATHYAPLKGEEH
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
gtgactgattcagaagcccgacaattgttcgagcaaattatggcgttgtatcctgaccca
cagccgacattacacgcgcaaaatccttttcagattctagtggcagtgatgctttcggcg
caaacaacggatgtagccgttaatgcggttacgcccgaactatttgccgcgtatccaacg
cccgcggcaatggctgctgcttcagtcaccgatattgccaaaaaaatcagtcgtcttggt
ttatatcgaactaaagcggcgcatttaaaagcgttgagtgctattttagttgaaaaatat
gacggtcaggtgccagccaatgcagctgacttggtcaaattaccaggagttggtaaaaaa
accgccactgtggtcctcagcgatgcttttggcataccgggcgtggcagttgatactcat
gttagtcgcattgtgaaaggattgggcctggtttcacctaaagcaacaccggttcaaatc
caaagccgacttgaaactttgatgccaaaatcgacctggatcaaacttcaccgcagtttg
attcgattcggccgtgaacatttacgcgcgcgagacccacagccaccatccggaccggaa
tggacgtttctggctacccattacgcgccattaaagggggaagaacattga
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