Lethenteron reissneri (Far Eastern brook lamprey): 133342441
Help
Entry
133342441 CDS
T09663
Name
(RefSeq) latent-transforming growth factor beta-binding protein 1-like isoform X1
KO
K19559
latent transforming growth factor beta binding protein 1
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Pathway
lrj04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
133342441
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lrj04990
]
133342441
Domain-containing proteins not elsewhere classified [BR:
lrj04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
133342441
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
TB
EGF
hEGF
EGF_3
FXa_inhibition
Plasmod_Pvs28
EGF_TEN
EGF_2
Ribosomal_L5e
Motif
Other DBs
NCBI-GeneID:
133342441
NCBI-ProteinID:
XP_061407614
LinkDB
All DBs
Position
14:13842053..13973511
Genome browser
AA seq
1746 aa
AA seq
DB search
MARALLLLSSVVLVLAALVLSTLPSAASHRPYRRLAAAHRAASAGRAAASQRAAGTGAGT
ATGSRGGPQSQANPAGGGRAPGTAGRGVATARRAAPQGAHGNAKRNAAAPHVAPPLTGAN
VCGGQCCPGWTLNAALHKCNKPVCAPPCQNDGMCLRPQLCLCRPGFHGQSCEVANLSPSR
GGHPRAPANSVPAAPAASVLLPGKQEPRAAPHGTHLPKTHNVARVSLAPGGSAQTSAQAR
SQQPRPRITGRDAPAQQVHRQAQPHIQARPGAQAQQAQQALPQSGPRVLAVTPGKSSAGQ
APQNDQPMDATASNGDLTMGAAPVPQRIKVVFTPTICTLDCSRGECRHSCSKGNVTTLIS
EHGRMIYPPHGSRFRIVVCSIPCQNGGHCITKEKCFCKPGYTGKFCHLAADPNSTEVADA
GSNGWKGSSTFTFPLSTLGNFSQASLANHPDLVKVHVKHPSEASVQIHQVARFSEDVTLQ
QLLADKAPHPEPHAPQPQPRQQPPQFPRVAHHQPILRQEPPPQQPHIQYVQDKSVGELDN
QAFHLPGYEQPRIPAATPPLGRCFREFSGDQCLKPLLGLTRQDDCCGSIGAAWGSNACTR
CPPKAEHPVMMDGEVLECPQGFRKENSTHCRDINECQFRGICPNGTCINQQGSFRCSCME
GYLWDSFGQECMSDMVLSSKIDMCYRAMDGQECVLPIPLPLTKHICCCSVGKAWGKNCEK
CPPQGLSSFKETCPAGMGYHFPSSEMKLNVRKLTDVEQMQITPERPAKAAAAVDPGRGDA
LPGAPRLPQHHAPPKIDVYSSLDGEPVITAPSTDNAKKTITGTDVHETSALQTPRRTSLP
ASSIVVSQTEALSVVKATVVNTCLQNPDICGHGECVHLDRGHTCVCSAGYKLNPSLTHCI
DVDECARSPAPCPGGRCENTRGGYRCVCSQGYAAARGGTECIDVDECERADACDGNGRCV
NTAGGYACHCHRGYSLSTDKGRKTCHDVNECENTILCPGGRCVNLPGSHRCEFCDPGYQM
SRRKECEDIDECQDPQACVNKRCVNIPGAFECVPCPSGFKAAGTKCEDVNECLNSMAVCR
DGRCIDLQGSYRCSCNPGFTPSGNGKRCDDVDECAERPCQNGECVNTPGSFKCSCPPGFQ
LSDGTNCRDIDECKTGNECEGGTCINTVGSFQCGCQPGFAALPGTDLCADVDECENASAC
SEHQYCINAMGSFQCHCDQGYQTAKEGLGCVDINECETITEVCGSELCDNEEGTFLCICP
YDYQEFDSQLGKCVPEPTAVYGIPSTPQPQPLQAGIHNFPGYSRYPEFVDSSEHYPQHPY
GQEPRLREPVGVPAAHVPAERRECYFNLNDENVCRNVLGRNVTRDECCCTVGAGWGTDCE
PAPCPLEGTGEFNELCPEGRGLVPSPNGRGYRDADECTLFSQELCRDSLCVNTQADYECY
CRTGYLYDRRRLHCVDVDECENSQSCVDGQCYNSEGSYSCYCSAPLTLDHTGRRCVNRTA
SSSDVFLDICWKEVSQGVMCSKPVAGRQTTYTECCCLYGEAWGPECAFCPPKTSDDYLTL
CNIRMRAEAQTFEEPHFGEQYPFEPHLLPDERGDFPPQTGALGHLPFRGLTEVQPYPPGQ
QENAGHDLMPGILPLYSTDDYKYNRYEGLQAEECGIAHGCENGRCVRVPEGFTCDCYEGY
RLDTLSVVCVDVDECEEQNPRAQLCSNGHCVNTDGSYRCVCRPGYAALPQQPNACVPVLR
HPLPFQ
NT seq
5241 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcgcgctgctgctgctgagcagcgtggtgctggtgctggcggctctcgtgctg
tccacgttgccgtccgcggcatctcaccgaccctaccggaggctggcggcggcgcacaga
gccgcatctgcaggacgggcggccgcgagccagagagctgcgggcaccggggccgggact
gcgaccggctcgaggggaggaccccagagtcaggcgaacccggccggcggcggaagggcg
ccggggacggccgggcgaggggtggcgacggcgcgcagggcggcgccgcagggagcgcac
gggaacgcaaagcggaacgctgccgcgccgcacgtggcccctccactcactggagcgaac
gtgtgcggtgggcagtgctgtccgggatggacgctcaacgccgctctgcacaagtgcaac
aaaccggtgtgcgcgcctccgtgccagaacgacgggatgtgcctccggccgcagctgtgc
ctctgcaggccgggcttccatggccagagctgcgaggtggccaacctgtccccgtcccgc
ggtggccacccacgtgccccagccaactcggtgcccgccgcccccgccgcgtccgtcctg
ctgcccgggaaacaggagccccgcgcagctcctcacggcacacacctgcccaagacgcac
aacgtggcgcgtgtgtctctggcgccgggcggttccgcgcagacatcggcacaagcgcgg
agccagcagccgaggccacgcatcacagggcgcgacgcccccgcccagcaagtgcaccgc
caggcgcagccccacatccaggcccgtccgggggcccaggcccagcaggcccagcaggcc
ctgccccaatccgggcctcgagtgttggcggtgacccccgggaaatcctcggctgggcag
gcgccgcaaaacgatcagccaatggacgccaccgcaagcaacggagacctcacgatgggt
gccgcgccagtcccgcagcgcatcaaggtggtgttcacgcccaccatctgcacgctggac
tgctcgcgcggagaatgccgccacagctgctccaagggcaatgtgaccaccctcatcagc
gagcacgggcgcatgatctaccctccacacggctccaggttccgcattgtggtatgctca
atcccgtgtcaaaatggggggcactgcataaccaaggaaaagtgcttttgcaagcccgga
tacacgggcaagttctgccaccttgccgctgaccccaactcaacggaagtggctgacgcg
ggcagtaacgggtggaagggctcttccacattcacctttccgctgtccactctcggaaat
ttctcccaagcctccctggccaatcatccggacctggtgaaggtgcacgtgaagcaccct
tcggaggcgtcggtgcagatccaccaggtggcccgcttctccgaggacgtcacgctacag
cagctgctggccgacaaggcgcctcaccccgagccgcacgcgccccagccgcagcctcgg
cagcagccgccgcagttcccccgcgtggcgcaccaccagcccatcctgcgccaggagccg
ccgccgcagcagccacacatccagtacgtgcaggacaagagcgttggcgagctggacaac
caggcgttccacctgccgggctacgagcagcccaggatccccgcggccacgccgccgctg
ggaaggtgcttccgcgagttcagcggcgaccagtgtctgaagccgctgctcgggttgacg
aggcaggacgactgctgcggaagcatcggagctgcgtggggaagcaacgcctgcacacgg
tgccctcccaaggctgaacatcctgtcatgatggatggggaagtcttggagtgtccccaa
ggcttcagaaaggaaaactcaactcactgcagagacatcaacgagtgccagttccgcggc
atctgtcccaacggcacgtgcatcaaccagcaaggcagcttcagatgcagctgcatggaa
gggtacctgtgggactcctttggccaggaatgcatgtcggacatggtgttatcgtccaag
atcgacatgtgctaccgagccatggacgggcaagagtgcgttctgccgataccactgccg
ctgacaaagcatatctgctgctgcagcgtcggcaaggcctggggcaagaactgtgaaaag
tgcccaccgcagggcctatcctccttcaaagaaacgtgcccggctgggatgggctaccac
ttcccttcgtctgagatgaagctcaacgtgcggaagctgacggacgtggagcaaatgcag
ataacgccggagcgaccggccaaggcagcggccgccgtggacccagggagaggggacgcg
ctccctggggccccgcgcctaccccagcaccacgcgcctcccaagatcgacgtctattca
agtcttgatggcgaaccggtgataacagctccaagcaccgataacgccaaaaaaactatc
acaggcacggacgttcacgagacctcggcccttcagactccacggcgcacttctctcccg
gcctccagcatcgtcgtgagccaaactgaggccctctccgtcgtgaaggccaccgtggtg
aacacctgcctacagaacccggacatctgcggacacggcgagtgtgttcacctggaccgt
gggcacacgtgtgtgtgcagtgccggctacaagctcaacccatcgctcactcactgcatc
gacgtggacgagtgcgcgcggagcccggcgccctgccccgggggccgctgcgagaacacg
aggggcggctaccgctgcgtctgttcgcagggctacgcggccgctcgaggaggaaccgag
tgcatcgacgtggacgagtgcgagagggcggacgcgtgtgatggcaacgggcgttgcgtc
aacacggcagggggctacgcgtgccactgccaccgagggtactcgctgtccaccgacaag
ggcaggaagacgtgtcacgatgtaaatgaatgtgagaacaccatcctgtgccccggggga
cgctgcgtcaatctgccaggttcacacaggtgtgaattctgcgatcctggctatcagatg
agtcgcaggaaagagtgtgaagatattgacgaatgtcaggatccccaagcttgcgttaat
aagaggtgcgtgaacattcctggggcgttcgaatgcgtcccgtgcccgagtggcttcaag
gcggctggaacaaaatgcgaagatgtgaacgagtgtctgaacagcatggcggtctgcagg
gacggtcgctgcatcgacctgcaagggtcttacaggtgttcctgcaacccgggcttcact
ccgtccggaaatggaaagcgctgcgatgacgtggacgagtgtgccgagcgcccgtgccag
aacggcgagtgcgtgaacacgcccggctcgttcaagtgctcctgcccacccggcttccag
ctcagcgacggcaccaactgtcgagatatcgatgagtgcaagacgggcaacgagtgtgaa
ggcggcacctgcatcaacacggtgggatcgttccagtgtggatgtcagccgggctttgca
gccctccccggcacagacttgtgtgcagatgtggacgagtgtgagaatgcgagcgcgtgc
agcgagcaccagtactgcattaacgcgatggggtcgttccagtgccactgcgaccaagga
taccagaccgcgaaggagggacttggctgtgtggatatcaacgagtgtgagacgatcacc
gaagtgtgcggctcggaattgtgcgacaacgaggagggcaccttcctgtgcatctgcccg
tacgactatcaggagttcgactcgcagctcggcaagtgtgtgccggagcccactgctgtc
tacgggatcccctccactcctcaaccacaacctctgcaggctggaatccacaacttccca
ggatactcaagatacccagaatttgtggactcatcagagcactatccacagcatccatat
ggacaagagcccagactgcgtgagccggtgggcgtgcctgcagcccacgtaccggccgag
agacgcgagtgctacttcaacctcaatgacgagaacgtctgccggaacgtcctggggcgc
aacgtgacgcgcgacgagtgctgctgcaccgtcggcgccggctggggcaccgactgcgag
cccgcgccctgcccgctggaagggaccggggagtttaacgaactttgcccagaaggaaga
ggactcgtcccaagccccaacgggagaggatatcgagatgccgatgagtgcacactcttt
agccaggagttgtgccgagacagcctctgtgtgaacacgcaggctgactacgagtgctac
tgccgcaccgggtacttgtacgaccggcgcaggctgcactgcgtggacgtggacgagtgt
gagaacagccagagctgtgtggacgggcagtgctacaacagcgagggcagctacagctgc
tactgcagcgcaccgctcacgctcgaccacactggccggcgctgcgtcaaccgcacggct
tcctcctcggatgtctttttggacatctgctggaaggaggtgtcccagggagtgatgtgc
agcaagcccgtcgcgggccgccagaccacctacaccgagtgctgctgcctctacggcgag
gcctgggggcccgaatgtgccttctgcccacccaaaacgtccgacgactacctcacgctg
tgcaacatccgcatgcgcgccgaggcgcagaccttcgaggagcctcacttcggcgagcag
tacccgttcgagcctcacctcctgccggacgagcgtggggatttcccgccccagaccggg
gcgctgggccacctgcccttccgcgggctcacggaggtgcagccgtacccccccgggcag
caggagaacgccggccacgacctgatgcccggcatcttgccgctctactccactgacgat
tacaagtacaaccgatacgaggggctgcaggcggaggagtgcggcatcgcccacggctgc
gagaacgggcgctgcgtgcgcgtgcctgaggggttcacgtgcgactgctacgagggctac
cgcctcgacaccttgagcgtcgtttgtgtcgatgtcgacgaatgcgaggagcagaatcct
cgagcacagctctgcagcaacggtcactgcgtgaacacggacggctcgtaccgctgcgtg
tgccgtccgggatacgccgccctgccccagcagcccaacgcgtgcgtgcccgtgctgcgg
cacccgctcccgttccagtag
DBGET
integrated database retrieval system
