Lethenteron reissneri (Far Eastern brook lamprey): 133342729
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Entry
133342729 CDS
T09663
Name
(RefSeq) LOW QUALITY PROTEIN: filamin-C-like
KO
K27393
filamin-C
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Pathway
lrj04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
133342729
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lrj04812
]
133342729
Cytoskeleton proteins [BR:
lrj04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
133342729
Intermediate filaments
Intermediate filament-binding proteins
133342729
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filamin
Ig_GEX2_N
CH
Y_Y_Y
Big_3_5
CFSR
FixH
Cep192_D4
CH_2
Motif
Other DBs
NCBI-GeneID:
133342729
NCBI-ProteinID:
XP_061408053
LinkDB
All DBs
Position
15:complement(12034354..12092811)
Genome browser
AA seq
2790 aa
AA seq
DB search
MDLEPHYVAHSRGDRMNGSPEEELRGQEVQAEDEIPAGEKELAEDAPWKKIQQNTFTRWC
NEHLKCANKTVTDLQKDLADGLRLISLLEVLSQKRMYRKYHSRPNFRQMKLENVSVALEF
LEREHIKLVSIDSKAIVDGNLKLILGLVWTLILHYSISMPMWDDEDEEEMKKQTPKQRLL
GWIQNKVPQIPITNFHRDWQDGKALGALVDNCAPGLCPDWQSWDPNKPVDNAREAMQQAD
DWLGVPQVIAPEEIVDPNVDEHSVMTYLSQFPKAKLKPGTPLRPKIDPNSVKAFGPGIER
SGNEVTRPAKFTVETLNAGVGEVLVYVEDPEGHTEEAKVTPNNDKRRTFSVVYHPKVAGL
HKVTVLFAGQHIPGSVFQVDVATVAVGDASKVTARGPGLEPSGNVAHKPTYFEIYTAGAG
VGEVGVVIVDPQGRADSVEVSLEDRGNSVYRCTYRPVTEGPHAVHITFAGEPIPRSPYTV
VISQACNPSACRAWGRGLQPKGVRVKEHADFRVHTKGAGTGELIVTIRGPRGTDEAVKRT
DVGDGVFEFEYCPAAPGKYTITITWGGHNIPRSPFEVIVEVEAGTQKVRAWGPGLETGVV
GKSANFVVEAVGTEVGTLGFSIEGPSQAKIECEDKGDGSCDVCYWPTEPGEYAVHVVCDD
EDIKGSPFIAHILPAPLDHFPERVKAHGPGLAHTGCVVDAPAEFTVDARAAGRGALKIYA
QNAEGELINVEVRDNHDGTFHCCYTPRKAIKHTIIIAWGSVNIPLSPFRVNVGEGSHPEN
VKVYGPGVEKTGLKANEPTYFTVDCSQAGQGDVSIGIKCAPGVVGPTEADIDFNIIKNDN
DTFTVKYSPPGAGRYTIMVLFAEQEIPSSPFRVKVDPSHDANKVKAEGPGLRPQGVEVGV
PTHFTVFTKGAGKAGLEVHFTSSTKGDAVRDFEIIDNHDFTYTVRYTAMQQGSMTVVVTY
GGDHVPKSPFTVAVAPALDLSKVKVSGLQSRVDVGREQSFTVATRDAGGQGKLDVRVWGP
SRKPVPCRIEPAPPAAGPGAPLSVHYVPKEEGPHKVEVTYDGHPVPDSPFAVEAITPADP
TKVRAYGPGLSGGEVGKPAPFTIDTKGAGTGGLGLTVEGPCEAKIQCQDNGDGSCSVSYL
PTAPGEYTINILFADTHVPGSPFRAQVRPSFDPSKVTVRGPGLERGKAGEACVFAVDCSR
AGTAELTVEVVQADGAARAEVRVHDNGDGTYAVTYVPPGPGLYAVTVKYGGVPVPRVPVR
VRIEPIVDTSGVRVFGPGVEPRGVLREVSTEFTVDARSLFSARSTTTTTTTTTTVARGSP
GVAAGKVRARLTGPSGTKTDATLTDQGDGTYRAEYTAYEEGVHTVEVTVDEVPVPRSPFR
VEVKEGCDPTRVRAYGPGLEGGLTHTPNRFTVETRGAGTGGLGLAIEGPSEAKMLCKDNK
DGSCSVEYIPFTPGDYDINITFGGLHIPRSPFRVLVKDAVDASKVRCSGPGLGPAVRAGI
PQTFTVDCSKAGRATLEVMVLDPRGLPEPLEVQDNGDGTHTVNYLTSQDGPYTIGVKYGD
QEVPRSPFKIKVLPTHDASKVKASGPGLNSSGVSASLPVEFTIDARDAGEGLLTVQITDA
KGNTSEATIFVRDWKSRAMEGSKPSPQAPQAAPHSTPTTFSDPDGKPKKANIRDNGDGTY
TVSYVPDMTGRYTITIKYGGDEIPYSPYRIRALPTGDASKCTVTVSIGGHGLGAGVGPTI
QINEETVITVDAKAAGKGKVTCSVSRPDGAELDVDVVENRDGTFDIYYTAPEPGNYTITV
RFGGELVPNSPFHVLATDQPPRGTDATPGGLRPFNLVIPFTVQKGEITGQVRMPSGKTAR
PDITDNKDGTVTVKYAPTEPGLHEMEIKYDGSHIPGSPLQFYVDAVNSGVVSAFGPGLSH
GVANKPAIFTIITKNAGEGGLSLAVEGPSKAEISCKDNKDGTCTVSYLPTAPGAYSIIVK
FDDQHIPGSPFTAKIIGDGSVRTTQLSVGTATDVSLKILESDLSSLSSSICAPSGKEEAC
LLKRLPNGHIGISFTPREAGEHMVSVRKGERHVANSPFRITVGPSDIGDAAKVKAWGRGL
SEGRTYEVAEFVVDTRGAGYGGLGLSIEGPSKVDINCEDQEDGTCRVTYCPTEPGTYIIN
IKFSDQHVPGSPFSVKVSGEGRMKESITRRRQAPSIATVGSTCDLNLKIPGNWFQMVSAQ
DRLTRTFTRSSHTYTRTERTEISKTRGGETKREVRVEESTQVGGGEPPSFPAVFGDLIGR
DTRSPFRPDEAGTYELTAQVTSPGGRTEEAEIVEGDDGTYSVRFVPRETGAHTVAVRYRG
QHVPGSPFQFTVGPLGEGGPNKVRASGPGLERGEAGMPAEFSIWTREAGAGGLSIAIEGP
SKAEISFEDRKDGSCGVSYVVTEPGDYEVSIRFNDEHIPDSPFTVPVSVPSEEARRLTVA
SLQESGLKINQPASFAVQLNGARGSLDAKMLSPSGALEACSITEIDADKFAVRFLPRENG
THSVEVKFNGSHIPGSPFRVRVGDPGQTGDPSLVSVYGAGLEGGTTGSPAEFVVDTRRAG
AGALAVTVEGPSKAKLDCVESSEGYRVNYTPMAPGTYNISVKYGGPGHVPGSPYKAKVTG
PRLAGGHSSHETSTVLVETVTKSSSKASSSTAAVATTSSSSSSASALTGTVSATRFTSDA
TKVVARGPGLTKAYTAQKNTFTVDCSNAGTNMLMVGVHGPRTPCEEVHVKHMGNRVYNVT
YMVKEKGDYVLIVKWGDDGIPGSPFHVTVP
NT seq
8373 nt
NT seq
+upstream
nt +downstream
nt
atggatctagaaccgcactatgttgcgcattcgcgcggagatcgcatgaacggctccccc
gaggaggagctccgcggccaggaggtgcaggcagaggacgagatcccggctggcgagaag
gagcttgccgaggacgcgccatggaagaagattcagcagaacacgttcacccgctggtgc
aacgagcacctcaagtgcgccaacaagacggtgaccgacctgcagaaggatctggcggac
ggcctcaggctcatctcgctgctggaggtgctgagtcagaagaggatgtaccgcaagtac
cactcgaggccaaacttcagacaaatgaagctcgagaacgtgtccgtggccctggagttt
ctggagcgggagcacatcaagctggtgtccatagacagcaaagccatcgtggatgggaac
ctgaagctgatcctgggccttgtttggacactgatcctgcactactccatctccatgccc
atgtgggatgacgaggacgaggaggagatgaagaagcagacgccaaagcagcgcctgctg
ggctggatccagaacaaggtcccgcaaattcccatcaccaacttccatcgcgactggcaa
gacggcaaggccctgggggcactggtggacaactgcgctcccggcctgtgccccgactgg
cagtcctgggaccccaacaagccagtggacaatgctcgggaggccatgcagcaggcggat
gactggctcggcgtcccacaggtaatcgccccggaggagatcgtcgaccccaatgtggac
gagcactcggtgatgacctacctgtcgcagttccccaaggccaagctgaagccggggacc
cccctccggcccaagatcgaccccaacagcgtgaaggccttcgggccaggtatcgagcgc
tcgggtaacgaggtgacgcgccccgcgaagttcaccgtggagacgctcaacgcaggtgtg
ggcgaggtgctggtgtacgtggaggaccccgaggggcacaccgaggaggccaaggtgacg
cccaacaacgacaagaggcgcaccttctccgtcgtgtaccaccccaaggtggccggcctg
cacaaggtgactgtgctgttcgccggacagcacatccccggcagcgtgttccaggtcgac
gtggcgacggtcgccgtgggcgacgccagcaaggtgacagcacggggacccggcctggag
ccgagcgggaacgtggcccataagcccacctactttgagatctacaccgcgggagcgggc
gtgggcgaggtgggcgtggtgatcgtggacccacagggccgtgccgactcggtggaggtg
tcgctggaagaccgcgggaacagcgtgtaccgttgcacgtaccggcccgtcaccgagggc
ccgcacgctgtgcacatcaccttcgccggggagcccatcccccgcagcccctacaccgtt
gtcatctcgcaggcctgcaacccgagcgcgtgccgcgcgtggggccgcgggctgcagccc
aagggagtgcgcgtcaaggaacacgccgacttccgcgtgcacaccaagggcgccggcaca
ggagagctcattgtcaccatccgcggcccgcgtggcacggacgaggcggtgaagcgcaca
gacgtcggcgatggcgtcttcgagttcgagtactgccccgcggcgcccgggaagtacacg
atcactatcacttggggcggccacaacatccctcgcagccctttcgaggtgatcgtggag
gtggaggccggcacacagaaggtgcgggcctgggggcccggcctcgagaccggcgttgtc
gggaaatcggcaaacttcgtggtggaggccgtggggacagaggtcggcacgctcggcttt
tcaatcgaggggccgtcgcaggcgaagatcgagtgcgaggacaagggcgacggctcgtgc
gacgtctgctactggcccacggagccgggcgagtacgcggtgcacgtcgtgtgcgacgat
gaggacatcaagggcagccccttcatcgcccacatcctcccggcaccacttgaccacttc
cccgagcgcgtcaaggcccacggcccgggcctggcgcacacgggctgcgtggtggacgcg
ccggcagagttcaccgtggacgctcgcgccgcggggagaggggcgctcaagatctatgcc
cagaacgccgagggggaactgatcaatgtggaggtccgcgacaaccacgatggaacgttc
cactgctgctacactccgcgcaaggccatcaagcacaccatcatcatcgcgtggggcagc
gtcaacatcccactcagccccttcagggtgaatgttggagaagggagccacccggagaac
gtgaaggtgtacggcccgggtgtggagaaaaccggcctcaaggccaacgagccgacctac
ttcaccgtcgactgcagccaagccggccaaggcgacgtgagcatcggcattaagtgcgcc
ccaggggtcgtgggccccacggaggccgacattgactttaacatcatcaaaaacgacaac
gacaccttcaccgtcaagtactcgccaccgggtgccggccgctacaccatcatggtgctg
ttcgctgagcaggaaatcccgtccagcccgttccgggtgaaggtcgacccatcacacgat
gccaacaaggtcaaggccgagggcccgggactccggccacaaggcgtggaagtgggcgtg
ccaacccacttcacggtgttcaccaagggtgccggcaaggccggactcgaggtccacttt
accagctccaccaagggcgacgccgtgcgcgactttgagatcattgacaaccacgacttc
acctacaccgtgcgctacacggccatgcagcagggctccatgacggtggtggtcacctat
ggcggggaccacgttcccaagagccccttcaccgtcgccgtggcgccggcactggacctg
agcaaagttaaagtcagcggcctgcagtcgcgcgtcgacgtgggccgcgagcagagcttc
accgtggcaacacgcgacgccggcgggcagggaaagctggacgtgcgtgtgtgggggccc
tcgcgcaagcctgtgccatgccgcatagagccggcgccccccgcggccgggccaggcgcc
cccctctccgtgcactacgtgcccaaggaggaggggccccacaaggtggaggtgacgtac
gacgggcacccggtgcccgacagccccttcgccgtggaggccatcacgcccgccgacccc
accaaggtgcgtgcctacgggccgggcctgagtggcggtgaggtgggcaagccggcgccg
ttcaccatcgacacgaagggtgccggcacgggcggcttgggcctcacggtggaggggccg
tgcgaggccaagatccagtgccaggacaacggcgatggctcgtgctccgtgtcgtacctc
ccgacggcgccgggggagtacaccatcaacattctgttcgctgacacccacgtgccgggc
tcgcccttccgagctcaggtgcgcccctcgttcgacccgagcaaggtgacggttcggggc
cccgggctggagcgcggcaaggcgggcgaggcgtgcgtcttcgcggtggactgctcccgt
gccggcacggccgagctcactgtggaggtggtgcaggcggacggcgcagcacgcgccgaa
gtgcgtgtccacgacaacggcgatggcacctacgccgtcacctacgtgccgcccggcccg
ggcctgtacgccgtcaccgtgaagtacggcggggttcccgtgccgcgcgtgcccgtgcgc
gtgcgcatcgagccgatcgtcgacaccagcggagtgcgcgttttcggccccggcgtggag
cctcgcggcgtgctgcgtgaggtgagcaccgagttcaccgtggatgctcgctccctgttc
tctgctcgctccacgaccaccaccaccaccacgacgaccaccgtggcaaggggcagcccg
ggggtggctgcagggaaggtgcgggcgcgcctcacggggccgtcgggcaccaagacggac
gccacgctcaccgaccagggagacggcacctaccgcgccgagtacaccgcctacgaggag
ggcgtgcacacggtggaggtgacggtggacgaggtgccagttccgcggagcccgttccgc
gttgaggtcaaggagggctgcgaccccaccagggtgcgggcctacgggcccggcctggag
ggaggcctcacgcacacccccaaccgcttcacagtggagactcgcggtgcgggcacgggc
ggcctgggcctggccatcgagggcccctccgaggccaagatgctctgcaaagacaacaaa
gatggcagctgcagtgtggagtacatccccttcacccccggggactatgacatcaacatc
accttcgggggccttcacatccccaggagcccgttccgggtgctggtgaaggacgcagtg
gatgccagcaaggtgcgctgctcggggcctggcttggggcctgcggtacgcgccgggatt
ccgcagacctttacggtcgactgcagcaaggccggtcgtgccacgctggaggttatggtg
ctggatccacgcggtctgcccgagccactggaggtgcaggacaacggggacggtacgcac
acggtcaattacctgacgagccaggatgggccctacaccatcggggtcaagtacggggac
caggaggtgccccgcagtccatttaagatcaaagtgctgccgacgcacgatgctagcaag
gtgaaggcgagtgggcccggcctcaactcgtcgggcgtgtcggcgagcctccctgtcgag
ttcaccatcgacgcacgcgacgccggagagggcctcctgacagtgcagatcacggacgcg
aagggaaacacgtccgaggcgacgattttcgttcgcgattggaaatcccgagcgatggag
ggctcaaagccttctccccaggcccctcaggccgccccccactccaccccaaccaccttc
tccgacccggacgggaagccgaaaaaagcgaacatcagggacaacggcgatggcacgtac
acggtgtcgtacgtgccggacatgacggggcgctacacgatcaccatcaagtacggcgga
gacgagatcccctactcaccgtaccgcatccgcgccctgcccaccggcgacgccagcaag
tgcaccgtgactgtgtccatcgggggccacgggctgggcgccggtgtgggccccacgatc
cagatcaatgaggagacggtgatcacggtggacgccaaggcggccggcaagggcaaggtg
acgtgttcggtgtcccgccccgacggtgccgagctggacgtggacgtggtggagaaccgc
gatggcaccttcgacatctactacacggcgcccgagccgggcaactacaccatcaccgtg
cgtttcggcggcgagctggtccccaacagccccttccacgtgctggccacggaccagccg
ccccgcggcacggacgccacccccggcgggctccggccgtttaacctcgtcatcccgttc
accgtgcagaagggggagatcaccggacaagtccgtatgccgtcaggaaagacggcacgc
ccggacatcacggacaacaaggacggaacggtgacggtgaagtacgcgccaacagagccc
ggactccatgagatggaaatcaagtatgacggcagccacatcccagggagccccctgcag
ttctacgtggacgcggtaaatagcggagtggtgagcgccttcgggccggggctgtcccat
ggcgtggccaacaagccggccatcttcaccatcatcaccaagaacgcgggcgaaggaggt
ctctctctggccgtggaggggccctccaaggcggagatctcctgcaaggacaacaaggac
ggcacgtgcaccgtatcctacctgcccaccgcacccggcgcctacagcatcatcgtcaag
ttcgacgaccagcacatcccgggcagccccttcaccgccaagatcatcggggacggctca
gtgaggaccacgcagctgagtgtgggcaccgccaccgacgtctcgctcaagatcctcgag
tcggacctgagctcgctctcctccagcatctgcgcgccgtccggcaaggaggaagcctgc
ctgctcaagcgtctgcccaacggacacatcgggatctcgttcacgccgcgcgaggcaggc
gagcacatggtgagcgtgcgcaagggcgagcgccatgtggccaacagcccattccgcatc
accgtggggccgtcagacatcggtgacgcggccaaggtgaaggcctggggacgcggcctc
tccgagggacgcacctatgaggtcgccgagttcgtggtggacacgcgcggcgctggttac
gggggcctgggcctgtccatcgagggccccagcaaggtggacatcaactgcgaggaccag
gaggacggcacgtgccgcgtcacctactgccccacagagcccggcacctacatcatcaat
attaagttctccgaccagcacgtgcccgggagtccattttcggtgaaggtatcaggcgag
ggccgcatgaaggagagcatcacgcggcgccgccaagcaccgtccatcgccaccgtgggg
tccacctgcgacctcaacctcaagatccccgggaactggtttcagatggtgtcggcgcag
gaccggctgacgcgcacgtttacgcgcagcagccacacatacacgcgcacggagcgcacg
gagatcagcaagacgcgcggcggggagacaaagcgggaggtgcgcgtggaggagtccacg
caggtgggcggcggcgagccgccgtccttccccgctgtcttcggggacctcatcggccgc
gacacgcgctcgcccttccgtcccgacgaggccggcacgtacgagctgacagcacaggtg
acgagccccggtgggcgcacggaggaagccgagatcgtagagggcgacgacggcacatac
agcgtgcgcttcgtaccgcgcgagaccggcgcgcacaccgtcgccgtgcgctaccgcggg
cagcacgtgcccggcagccccttccagttcacggtggggccgctcggagagggaggcccc
aacaaggtgcgcgccagcgggccggggctggagcgaggggaggccggcatgccggcggag
ttcagcatctggacgcgggaggcgggggctggggggctctccatcgccatcgagggccct
agcaaggccgagatctcatttgaggatcgcaaggacggctcctgcggggtctcttacgtc
gtcaccgaacccggcgactacgaggtgtccatccggttcaatgacgagcacatccccgac
tcgcccttcacagtgcctgtgtcggtgccatccgaggaggccaggcgcctcaccgtagcc
agcctgcaggaatcggggctcaagataaaccagccggcatcgtttgcggtgcagctgaat
ggcgcgcgcggctccctcgacgccaagatgctgtctccatcaggcgccctggaggcctgc
agcatcacagagatcgacgcagacaagttcgcggtgcggttcctgcccagggagaacggc
acgcacagcgtggaggtgaagttcaatgggagccacatccccggcagccccttccgcgtg
cgcgtcggcgaccctggccagaccggcgaccccagcctcgtgtcggtgtatggagccggg
ctcgagggcggcaccactggctcaccagcggaattcgtggtggacacgcggcgtgccggc
gccggcgccctggccgtcacggtggaggggccctccaaggctaagttggactgcgtggag
agctccgagggctaccgcgtcaactacacacccatggcgcccggcacctacaacatctcc
gtcaagtacggcggtcccggccacgtgcccggcagcccctacaaggccaaggtcacaggc
cctcgcctcgcaggaggccacagctcgcacgagacgtccacggtgctggtggagacggtc
accaagtcatcctcgaaggcctcctcctcaacagccgctgtggccaccacctcgtcgtcc
tcatcgtcagcgagcgccctcacagggacggtgtccgccaccaggttcacgtccgacgcg
accaaggtggtggcgcggggacctgggctgacaaaggcctacacggcacagaagaacacc
ttcactgtggattgcagcaacgccggtaccaacatgctgatggtgggggtgcatgggccc
cgcacgccgtgcgaggaagtgcacgtgaagcacatgggcaaccgcgtctacaatgtcacc
tacatggtgaaggaaaagggcgactacgtcctcatcgtcaagtggggcgacgacggcatc
cccggcagtcccttccacgtcaccgtgccctag
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