KEGG   Lethenteron reissneri (Far Eastern brook lamprey): 133343293
Entry
133343293         CDS       T09663                                 
Symbol
SMNDC1
Name
(RefSeq) survival of motor neuron-related-splicing factor 30
  KO
K12839  survival of motor neuron-related-splicing factor 30
Organism
lrj  Lethenteron reissneri (Far Eastern brook lamprey)
Pathway
lrj03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lrj00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    133343293 (SMNDC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:lrj03041]
    133343293 (SMNDC1)
Spliceosome [BR:lrj03041]
 Complex A
  U2 snRNP components
   U2 related factors
    133343293 (SMNDC1)
 Complex B
    133343293 (SMNDC1)
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    133343293 (SMNDC1)
SSDB
Motif
Pfam: SMN_Tudor TUDOR DUF4537 Stn1
Other DBs
NCBI-GeneID: 133343293
NCBI-ProteinID: XP_061408755
LinkDB
Position
17:complement(371436..379114)
AA seq 241 aa
MAEDLPTQLSNYKVQLQQVEAALTADPNNQDLLKLKKDLQEVIDLTQDLLTTQTSESSAS
AAEREPGRSQAPSWAVGDHCLATWNEDGQWYEAEIEEVNVDGGTVAVTFAGYGNTEVVPM
HSLKPVEQERQLSHELDTGNKPKSKKELLAQQREYKKKKALKKAQRMKDMETERESQKSK
WQDFNNKAYCKTKKGHVKKSIFASPESVNGRVGVGTCGIADKPMTQFQDAAKYNVRHYMP
Q
NT seq 726 nt   +upstreamnt  +downstreamnt
atggccgaggacctgccgactcagttgagcaactacaaggtgcagcttcagcaggtggag
gcagcactcactgccgaccccaacaatcaggacctgctcaagctcaagaaggatctgcag
gaggtgatcgacctcacgcaggacctgctgacgacacagacgagtgagagctccgccagc
gctgccgagcgcgagccgggccgcagccaggcgccatcctgggccgtgggagaccactgc
cttgccacgtggaacgaggacggacagtggtacgaggcggagatcgaggaggtgaatgtg
gatggcggcacggtggccgtgacgtttgcgggctacggcaacacggaggtggtgcccatg
cactcgctgaaaccggtggagcaggagcgccagctgagccacgagctcgacacgggaaat
aagcccaagtcaaaaaaggagctgctggctcaacagagagagtacaagaagaagaaagcc
ctcaaaaaagcgcaaaggatgaaggacatggagacagagagggaatcgcagaagagcaaa
tggcaagacttcaacaacaaagcctactgcaaaacaaagaaaggccacgtgaagaagagc
atattcgcttccccggagagcgtgaacggccgtgtgggtgtgggcacctgtggaatcgcc
gacaagcccatgacgcagttccaggacgcggccaagtacaacgtgcggcattacatgccc
cagtga

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