Lethenteron reissneri (Far Eastern brook lamprey): 133343740
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Entry
133343740 CDS
T09663
Symbol
PRDM6
Name
(RefSeq) LOW QUALITY PROTEIN: putative histone-lysine N-methyltransferase PRDM6
KO
K20795
[histone H4]-lysine20 N-methyltransferase PRDM6 [EC:
2.1.1.361
]
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Pathway
lrj00310
Lysine degradation
lrj01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
133343740 (PRDM6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lrj03000
]
133343740 (PRDM6)
03036 Chromosome and associated proteins [BR:
lrj03036
]
133343740 (PRDM6)
Enzymes [BR:
lrj01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.361 [histone H4]-lysine20 N-methyltransferase
133343740 (PRDM6)
Transcription factors [BR:
lrj03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
133343740 (PRDM6)
Chromosome and associated proteins [BR:
lrj03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
133343740 (PRDM6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2
zf-C2H2_4
zf-H2C2_2
SET
zf-C2H2_15
C2H2_ASCIZ_4th
zf-C2H2_jaz
Zf-C2H2_ZNF451_C
Motif
Other DBs
NCBI-GeneID:
133343740
NCBI-ProteinID:
XP_061409494
LinkDB
All DBs
Position
18:4678653..4742582
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AA seq
656 aa
AA seq
DB search
MSCATNMAQRGCMELSAIRQEIWPFPAADGSLQGAQDIMKPTASYPSAFLKVDAAYVRHW
QQQLLPHGLPAAQDPGPPRASLDLHLPDLSEPGPLAMGGSEATQEAKVAAAAAAAAAAAA
AAGPTLLQLQLQACKPTLQSCMPGSAAAAAAAAVVPMRGGQQVLFDMAGSGPACAGHNEG
PPSVRTAGPFERAFVQASSPFTAEELDYYLYGQQRMEIIPVNNHGDDTSNRCDMCADNRS
GECPMHGPLHSLRRLVGTSAPPASAASSLRPEPPASVRASLPRELCLCSSGLPGAGLGLC
AAQRLPAGTWLGPYDGARVPVERLRAGAVRNTRHLWEVYDSDGCLLHFLDGSEPGRSSWM
RYIRCARHRAEQNLSVLQHKSCIFYRACADIPRGSELLVWYDESYASFLGIPLQHVAQDD
TANVPLSAAEAMSRHEALSPFGKAGKLPPPAVHWPSQALPAAGRSYPQGDRPGAAYSYGC
NGSASGVGSSPGSGMGLGGIGGGAGGGGVGGHKVLASPTSTSQLGGEFSDWHLWKCGQCF
KTFTQRILLQMHVCSQNPDRPYQCGHCAQSFSQPSELRNHVVTHSSDRPFKCGYCGAPFA
GATTLNNHIRTHTGEKPFKCERCEQSFTQATQLSRHQRTPNECKAPADCGESIEVD
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atgtcttgcgcgaccaacatggcacagagaggctgcatggagctgagcgccatccgccag
gagatctggcccttcccggcggccgacgggtccctgcaaggcgcgcaggacatcatgaag
cccacggccagctacccctcggccttcctcaaggtggacgccgcctacgttcgtcactgg
cagcagcagctgcttccacacggcctcccggcggcgcaggacccgggaccaccccgcgcc
tctctcgacctccacctcccagacttatccgagcccggccctctggccatgggcggcagc
gaggccacgcaggaggcaaaggtggcagcagcagcagcggcagcggcggccgcagctgcg
gcagcagggcccactctgctgcagctccagttgcaagcttgcaagccgaccctgcagtcg
tgcatgcccggctccgccgccgccgcagcagcagcagccgtcgtgccgatgcgtggcggc
cagcaggtgctgtttgacatggccgggtcggggccagcgtgcgccggccacaatgagggc
ccaccgagcgtgcggactgcggggcccttcgagagggccttcgtgcaggccagcagcccg
ttcacggcggaggagctagactactacctgtacgggcagcagcgcatggagatcatcccc
gtgaataaccacggcgacgacaccagcaaccgttgcgacatgtgcgccgacaaccgcagc
ggcgagtgccccatgcacggccccctccactcgctccgccgcttggtcggcacgagcgca
ccgccggcatcggccgcgtcgtccctgcgccccgagccgccggcgtccgtgcgcgcctcg
ctgccccgcgagctctgcctgtgcagcagcggcctgcccggcgccggcctcggcctctgc
gctgctcagcggctgcccgcgggcacctggctgggtccctacgacggagcgcgagtgccc
gtggagaggctgcgtgcgggagcggtccgcaacactcgccacctttgggaggtgtacgac
agcgacgggtgcctgctgcacttcctggatggcagcgagcccggacggagcagctggatg
cgctacatccgctgtgcgcgccaccgtgccgagcagaacctctccgtcctgcaacacaag
tcgtgcatattttaccgagcatgcgccgacatccctcggggctcggagctgctggtgtgg
tacgacgagtcgtacgcctctttcctggggatccctctgcagcacgtcgcgcaggacgac
accgcaaacgtgcccctgtctgccgcggaagccatgtcgcggcacgaggccctgtcgccc
ttcggcaaggcgggcaagcttccgccccccgccgtgcactggccgagccaggccctgccg
gccgccgggaggtcgtacccgcagggcgacaggcccggggcggcctacagctacggctgc
aacggcagcgccagcggcgtgggcagcagccccggctccggcatgggcttgggtgggatc
ggcggtggcgcagggggcggtggggtcggaggtcacaaggtgctggcgagtcccacgtcc
accagccagctgggtggggagttcagtgattggcacctgtggaagtgtggccaatgcttc
aagaccttcacgcagcgaatcctgctgcagatgcacgtgtgttcgcagaacccggacagg
ccctaccagtgtggccactgcgcccagtccttctcccagccctcggagctgcggaatcac
gtggtcacccactcgagtgaccgtccgttcaaatgcggctactgcggggcgcctttcgct
ggagccaccacactcaacaaccacatccgcacgcacacgggcgagaagcccttcaagtgc
gagcgatgcgagcagagcttcacgcaggcaacgcagctgagccgccaccagcgcacgccc
aacgaatgcaaggccccggccgactgcggagaatcgatcgaggtggattga
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