Lethenteron reissneri (Far Eastern brook lamprey): 133344871
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Entry
133344871 CDS
T09663
Symbol
GLI2
Name
(RefSeq) LOW QUALITY PROTEIN: zinc finger protein GLI2
KO
K16798
zinc finger protein GLI2
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Pathway
lrj04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
133344871 (GLI2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lrj03000
]
133344871 (GLI2)
Transcription factors [BR:
lrj03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
133344871 (GLI2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_15
zf-C2H2
zf-H2C2_2
Zap1_zf1
zf-C2H2_4
zf_C2H2_ZNF292
FOXP-CC
Motif
Other DBs
NCBI-GeneID:
133344871
NCBI-ProteinID:
XP_061411135
LinkDB
All DBs
Position
20:complement(16219205..16306256)
Genome browser
AA seq
1850 aa
AA seq
DB search
MPVTMETAERPAAAPPGGCKAEDVAAERAPASSTTPHDDEALGAGYVRERRNALPTLAPG
APGPSSSSSGTGQDGNGGGSGRTREEPGTTTHRAAAPAKPSVGPPLSSSTSSLSSESARR
SSMGRSVPAAGSPHAVYRPPGYPPPDPRATCLDSPYGSTHLSDLYVLAGPHPLLHALHAP
IPINSRHQEGRYFYEPPPLHPLHGAPVISASPVFPDVSLLRFSPHHAPVLETPFGSAHAQ
ALVGPYVDQYLRSVHGSPSLSVISAARGLSPAHAPHDGLKERGAYPFPTPPPPPPAPPPP
HPASASTAAEYYQQLALMASHGGAGYAGGFLPHHAAAAAAAAAAAAAAGPPPSTLDFMRH
LEMASRYSSPRPGSIGARLSRKRALSISPHSEGSLDLHAMIRSSPNSLLAFLSSSRSSSA
XASGSYGHLSAGAASPSLGFAHAATPAAFHHMVSRHRSAFGHTPPLPHHPAARHALTGLP
PAPPGACSEAMESKPSGEMAVSSTGDPQAFTKRSKAKSEAGALACARAAQHQQRMQQELE
QSGQLEDDCDRDELKQEPEALYETNCRWEECVREYETQEQLVHHINNEHIHGERKEFVCR
WRDCSREKKPFKAQYMLVVHMRRHTGEKPHKCTFEGCAKAYSRLENLKTHLRSHTGEKPY
VCEHEGCNKAFSNASDRAKHQNRTHSNEKPYVCKISGCTKRYTDPSSLRKHVKTVHGPDA
HVTKKQRGAGDAPTPRAPPGAGGGGSGGTRDGAGATSGGRGGGGGATAGKLGINSPGSAH
GEQRGRDAEDGQIRSVKTEKSVTSPGSQSSCSSELSPFSQHEATEGDGTEMGEEGDLPGD
DADERGGDEGAAPGETDGMAGFGVSVGLPARRSAATTCATQRLEQLKLGRLRHVGGTDAR
GRMGPEGAAITRLPPINGRQNFSGCLTILPENPGVQDSYLNDVAALNQLNERRDSATSDL
SSAYMSSRRSSGASPCHPPTGRRHLSTADSYDPISTDTSRRSSQASHGGGDGGGPPPSLL
SLTPLQQYRLKATYAAATGGPPPTPLPHMERMALRTRVAMMATIATDGEREAARDPGTES
PFQGGARLNPAPVAGQLHQRRCSDGGACGYGASHTPLPHEIPGIGTRRASDPVRRAPHRL
QGLPTVPLHHGPQLQHRYNSLNLVPHPPAVPAMMDQRHGGPLRATGYARSDGSLHRGAYS
PRPPSISENVVMEAVAMESEAHIPEEDMVLPDDLMQYIAAEESNMAARAVGNGMAYGEQP
SQGFQAGFNGQGHGPYNPANHQAQQSPIAMSSGANYGQAYPMMGHCQSGQAANRQTQYRM
PGQMMSPDTNKNLPIQWNEVSSGSVRNNPSANCAHAATAPRRPAQANLGLVRQNEAFIQY
QPHPTQQQQNFYQQGMPNGNHMAQQQQHHQQQQQQLQGQYNCYKQTRATAGSGQGYVMQV
SPAQAEMSSCQNGMALNPGSSQRPTACGGIHLSPIHHPSCMQQQQQSPLRTGVQPCSQTG
VCSGKPLVNQNFSQAPQGFAQSQQLLANHGSEQNAGMMGAHRGNVQAKVGAAARSNYNSP
VHQSPNHVPYQSPHAHNPMLSPRQQSYGPGQHVQSTIQPHPPAYRKPGTVQAATALTSAA
VQQQAYSGSHGQLTNGLSPAHSAIGASPNRPMQVEGEAHSSGMHIQSQPMHYTGQIQMYD
GGMVQYGQQNGGGGSVAPSYHGQESSAAQQSMAATGLQKPTEAMLSPGTGQVSSSTSAAM
ASLDATLPSQIDFEAMILDDGDHFSLVSGPLSPGLLQSLSQASSRLTTPRGSVTLAPGRA
AAGSAGGLAGIGIGQPVAPVAPGMSNMAIGDMSSMLSTLVEESKFLTMMP
NT seq
5553 nt
NT seq
+upstream
nt +downstream
nt
atgccggttaccatggagacggcggagcggccggcggcagcgccgccaggcgggtgcaag
gctgaggacgtggcggcggagagggccccggcctccagcaccacgcctcacgacgacgag
gcgctgggcgcaggctacgtgcgcgagcgtcgcaatgccctccccacgctggctcccggc
gctcccggccccagctcctccagctccggcaccggccaggacggcaacggcggcggcagc
ggccggacccgcgaggagccgggcacgaccacgcatcgcgccgcggcgccggccaagccc
tccgtggggccacctttgtcctcctccacctcgtcgctgtcgtccgagtcggcccggagg
tcctcgatgggacggtcggtgccggcggcgggcagtccgcacgccgtgtaccgaccgccc
gggtacccgcctcccgacccgcgcgcgacctgcctcgactcgccctacggttccacgcat
ctttctgatctatatgtcctcgcaggccctcacccgctgctgcatgcgctgcacgccccc
atccccatcaacagccgccaccaggagggccgctacttctacgagcctccccccctacac
ccgctgcatggggcccccgtgatctcggcgagcccggtgttcccggacgtgtccctcctg
cgcttctctccgcaccacgcgcccgtcctggagaccccattcggcagcgcccatgcgcag
gcgctcgtggggccctatgtggaccagtacctgcgctccgtgcatgggagcccatccttg
tctgtcatctcggctgcccggggactcagccccgcgcatgccccccatgacggcctgaag
gagcgaggagcgtaccccttcccgacgccgccgccgccaccccccgccccgccgccaccg
caccccgcgtccgccagcacggccgccgaatattaccagcagctggcactgatggcgagc
cacgggggggcgggctacgcgggcggctttctgccgcaccacgccgctgccgccgccgcc
gccgccgccgctgccgccgccgctggaccgcccccctccacgctcgacttcatgcgccac
ctggagatggcatcgcgctactcgagccctcgccccggcagcatcggcgctcggctcagc
cgcaagcgcgcgctgtccatctcgccgcactcggagggcagtctggacctgcacgccatg
atccgctcgtcgcccaactcgctcctcgccttcctcagtagctcgcgcagcagctccgcc
nntgccagtggctcctacggacacctgtcggccggcgccgccagtcccagcctgggtttc
gcccacgcggccacgccagcggccttccatcacatggtgagccggcaccgttcggccttc
ggacacacgccgcccctgccgcaccacccggccgcccggcacgcgctcactggcctcccg
ccggcgccgcccggcgcctgctccgaggccatggagagcaagccgagcggcgagatggcg
gtgagcagcacgggcgacccgcaggcgttcaccaagcgctccaaggccaagagcgaggcg
ggggcactggcctgcgcacgcgctgcacagcaccagcagaggatgcagcaggagttggag
cagagtggacaactggaggacgactgcgatcgcgacgagctgaagcaggagcccgaggca
ttgtacgagacgaactgccgctgggaggagtgcgtgcgcgagtacgagacgcaggagcag
ctcgtgcaccacatcaacaacgagcacatccacggggagcgcaaggagtttgtgtgccgc
tggcgcgactgcagccgggaaaaaaagccgttcaaggcgcagtacatgctggtggtgcac
atgcggcggcacacgggcgagaagccacataagtgcacgtttgagggctgcgccaaagcc
tactctcgcctggagaacctcaagacgcacctgcgctcacacacgggcgagaagccgtac
gtgtgcgagcacgagggctgcaacaaggccttctccaacgcgtcagatcgcgccaagcac
cagaaccgcacgcactccaacgagaaaccgtacgtgtgcaagatctcgggctgcaccaag
cgctacacggaccccagctccctgcgcaagcacgtcaagacggtgcacgggcccgacgct
cacgtcaccaagaagcagcgcggcgccggcgatgccccgactccccgcgcgccccccggg
gccggtggaggcggcagtggcggcaccagggacggcgccggtgcgaccagcggtggcaga
gggggtggcggcggtgccaccgcggggaagcttggcatcaacagcccgggatcagcacac
ggggagcagaggggacgtgatgcggaggatgggcagattcgatcggtgaagacggagaag
tctgtgacgtcgccgggcagccagtcgtcgtgcagcagcgagctctcgccgttcagccag
cacgaggccacggagggcgacgggacggagatgggcgaggagggcgacctgccgggagac
gacgcggacgagcgcggcggggacgagggggcggcgcccggcgagacggatggcatggcc
gggttcggagtgtccgtggggctgcctgcgcgccgctcggccgccaccacgtgtgccacg
cagaggctggagcagctgaagctgggacggctgcggcacgtcggcgggacggacgcacgc
ggccggatggggcccgagggcgcggccatcacacggctgcctcccatcaacggccgccag
aacttctcgggctgcctcaccattctgccggagaacccgggcgtccaggactcgtacctg
aacgacgtcgccgcgctcaaccagcttaacgagcgccgcgacagtgccaccagcgaccta
agctcggcctacatgagcagccggcgctcgtcgggggcatcgccctgccacccgcccacg
ggccgccgccacctcagcacggccgactcgtacgaccccatctccacggacacgtcgcgc
cgatccagccaagccagccacggcggcggagatggtggggggcctcctccgagcttgctc
agcctcacgccgctgcagcagtaccggctcaaggccacgtacgcggcggccacgggcggg
cccccgcccacgccgctgccgcacatggagaggatggcgctgcggacgcgtgtggcgatg
atggcgacgatcgcaacggacggcgagagggaagccgcgcgcgacccgggcacggagtcg
ccgttccagggaggagcacggctcaatccggcaccggtggctgggcagctgcatcagcgg
cggtgcagtgacggtggcgcgtgcggctacggcgcgagccacacaccactgccgcacgag
attccgggcatcggcacgagacgcgcgagcgaccctgtgcggagggcaccgcaccgactg
cagggcttgcccacggtgccgctccaccacggcccgcagctgcagcacaggtacaacagc
ctgaacctggtgccgcacccccccgcggtgccagctatgatggatcagcgccacgggggc
ccgctcagggccacgggatacgcgcgctccgacggaagcctgcaccggggcgcgtactct
ccgcggccgcccagcatcagcgagaacgtcgtcatggaggctgttgccatggaatcggaa
gcccacatccctgaggaggacatggttctgcccgacgacctgatgcagtacatcgccgcc
gaggagagcaacatggcagccagggccgtgggaaacgggatggcgtacggggagcagccg
agccagggcttccaagcgggtttcaacgggcagggccacggcccgtacaacccggctaat
caccaggcccagcagtcacccatagcgatgtccagcggcgccaactacggccaggcctat
cccatgatgggccattgccagtcggggcaggcagccaatcgacagactcaatatcgcatg
cctggccagatgatgtcgccggacacgaataagaacttgccgatacagtggaacgaggtg
agctcaggcagcgtgaggaacaatcccagcgccaactgtgcgcatgccgcaacagcacca
cgcaggccggcgcaagcgaaccttggcttggttcggcaaaacgaggctttcattcagtac
cagccacatcctacgcagcaacagcagaacttctaccaacaaggcatgcccaatgggaat
cacatggcacagcagcaacagcaccatcagcaacagcagcagcaattgcagggccagtat
aattgctacaagcaaacgagagccacagcaggatcaggtcagggctatgtgatgcaagtg
agcccagcccaggctgagatgagctcatgtcagaatggaatggcgctgaatccaggctcc
agccaaagacctacagcgtgtggaggcatccacttgagcccaatccatcatcccagctgc
atgcagcaacagcaacagtcgccgctgaggaccggggtgcagccttgctcgcagactggt
gtctgctccgggaagccgctcgtgaaccagaacttttcccaagctccgcagggcttcgcg
cagtcgcagcagctgctggcgaaccacggtagtgagcagaatgcggggatgatgggtgcc
catagaggaaacgtgcaggcgaaggtgggtgcagccgctcgttcgaactacaactcgcca
gtgcatcagagtcccaatcacgtgccttaccagtcgccgcatgcgcacaatcccatgctg
agccccagacagcagagctatggcccaggtcaacacgtccaaagcacaatacagcctcac
cctcctgcctacagaaaacccggtaccgtccaagctgccaccgcattgaccagcgctgct
gttcagcagcaggcttactcagggagccacgggcagctgacgaacggactgagccccgcg
cacagcgccattggcgccagtcccaacaggcccatgcaggtggagggagaggcgcactcc
agcggcatgcacattcaaagccaacccatgcattacacgggacagattcagatgtacgac
gggggcatggtgcaatatgggcagcagaatggcggcggcggtagcgtcgcgccgagttac
cacggccaggagagcagcgctgcgcagcagtcaatggcggccaccggtctgcagaaaccc
acagaggcgatgttgtcgccaggcaccgggcaagtaagcagcagcacgtcggcagcgatg
gcaagcctcgatgctacgttgccatcgcagatcgactttgaggccatgatcctggacgac
ggagaccacttcagtctcgtgtccggtcccctgagcccagggctgctgcagagcctctcg
caggcctcatctcgcctcaccacgccgcgcggctctgtcacgctggcgccaggcagggcg
gccgcagggtcggcggggggccttgccggcatcgggatcggccagcccgtcgcaccggtg
gcgcccgggatgtccaacatggccatcggagacatgagctcaatgctgtcaacactggtg
gaagagagcaagttcctcacaatgatgccttag
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integrated database retrieval system
