Lethenteron reissneri (Far Eastern brook lamprey): 133349209
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Entry
133349209 CDS
T09663
Symbol
OTOF
Name
(RefSeq) otoferlin isoform X1
KO
K19949
otoferlin
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lrj04131
]
133349209 (OTOF)
Membrane trafficking [BR:
lrj04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
133349209 (OTOF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
FerB
Ferlin_C
dsrm_Ferlin
FerI
Motif
Other DBs
NCBI-GeneID:
133349209
NCBI-ProteinID:
XP_061418480
LinkDB
All DBs
Position
29:complement(5961169..6086550)
Genome browser
AA seq
2039 aa
AA seq
DB search
MALVVHLKQVSELRGKGDRVAKLTFRGVPYNTRILENCEDEALFDEVFRWEVGTPVEGHE
MLEIQVFNFSKVFTNKLLGTFCMVLQQVVEDGVLEITDTLLDDNNTPTKTAVTVEVRMQE
GSWSDGDLLQFDSRGLEDEGLLANPANNAGRKRTTDEEGGSCYNSDEDANSSYSCEDHSQ
EEDDKGALGKLAGLKTKDGYRALSSKSKQGKRSAIKGFSKGTEGAKAKDAKDKGGKPDKA
GVKSVFSGIKLVKTKSPKDQNSSAGNKNSSDEPAVIDTDHRPKSGRGKDFDTMSMASITA
VTTNVSNKRAKPDAKMEPTSGRPQDYQVSITIIEARQLMGLNMDPVVCVEVGEEKKYTSM
KESTNCPYYNEYFVFDFHVPPEVLFDKIVKLSVIHSRNILRSGTLVGMFKLDVGTVYTQP
EHQFYHKWAVLSDPDDITSGVKGYLKCDIAVVGKGDTIKTLHKSKESEDEDVDGNLLLPE
GVPVERQWARFYVRIYRAEGLPKMNTSLMANVKKALTGDDKDMVDPYVSISFAGQKGKTS
VQKGSCEPVWNEQVIFTEMFPPLVRRMKIQIRDSDKVNDVAIGTHFVDLRKIANEGDKGF
LPTFGPAWVNMYGSTRNYTLMDEHQELNEGLGEGVSFRARLLISIVMEFLDTSSPDVTSS
TDIQSETIPPISENSTGRIDEFFLFGTFLEATMIDRKIGDKPINFEVTIGNYGSLIDGTD
KADPGKKKSANDDEVELLSRTFDEENFESDMGTLSTTPPRKPVITDRNYYHLPYYEEKPC
IHIKSHWQDQRWRLYNSNIMESTADKLEEGINDVQEIISTEKPHPERRLRGVLEELSLGC
LRFVALAKKDKQQNGQTRLDKERLKACTHELETMAMQAKTLRINVKRATLKEKLKQAYNF
LQKLRFLADEPQHSVPDVYVWMLSNNKRVAYARISAKDILYSPIDDEMGKDCGKIKTLFL
RLPGKKSFGSGGWTVQAKLEAYFWLSLHKHRKDFMNGLPNGYEQKKAKNSSPIAQALPPI
SLIYKEKQMFQLRVHMYQARSLFAADSTGLSDPFGRIIFSTHSQATEVIPETLCPTWDQM
LVFDSIELYGEAQELRDDPPIIVIEVFDQDTPSKLGGSGKADFIGRALAKPVVKMSNEKY
DAPRFPPQLDYYQIYRGNSTAGELLAAFELLQIPPSGKGDLPPISGPTDTEHGTILPVPR
GIRPILSKYRIEVLFWGLRDLKRIQLVTVDRPRVDVECSGKSVQSVVIPSYKQNPNFSTL
FKHFEVDLPDNELLHPPLNIRVVDCRAFGRYTLVGTHTVTSLRKFILRAPSKTKAANIRT
IAGDAAINMEEISLRKAETMVRLDPNSDAVVKIESVESEKDSKKKKKKKGVEEEEEDEPD
EELLDWWSKYFVSIETLKEQQKMQEETEEEKESDSGEERRSPKMAGKAGAKVKVGEREEK
KEVKRRMRVEELKMFDKELEAEFDNFEDWLHTFSLYRGKIEDDDSSMEEDRLVGRFKGSL
CVYKYPLPEELAREVGYDPQFGMFQGIPSNDPIGVLVRVYVVRANDLHPADVNGKADPYI
VVKLGKHEVKDKENYISKQLNPVFGKSFDIEAVFPMDSMLTVSIYDWDLVGTDDLIGETK
IDLENRLYSKHRPTCGISQRYSIHGYNMWRDPLKPSQILARLCKEVKVDPPQYSPEGRVK
VANRTFTAATEVEDENGQKKPTDEHMALTVLHHWEEIPGACKLIPEHIETRPLLHPEKPG
IEQGRIEMWVDMFPADVPRPGPPIDIAPRKPKSLEMRVIIWNTDDVILEDDSLLTGEKSS
DIFVRSWLKGQQEDKQDTDVHYNSVTGEGNFNWRFVFPFDYLVAEEKIVMSKKESVFSWD
ETEYKIPARLTLQVWDADHFSADDFLGAIELDLNRFPRGAKTSKLCSLDMLKTDGSVPMI
SIFKQKRIKGWWPFAARNENDELELTGKVEAEIHLLTSEEAEKSPAGLGRNEPDPLEKPN
RPDTSFMWFLTPLRSIKYLICHRYKWLIVKIVLALLLLAMLALFLYNMPGYMVKKLLGA
NT seq
6120 nt
NT seq
+upstream
nt +downstream
nt
atggcacttgtggtccacctcaagcaagtgtccgagttgcgtgggaagggagaccgagtc
gctaagctaacttttcgaggagtaccgtacaacacccggatcctggagaactgcgaggat
gaggccctctttgacgaggtctttcgctgggaggttggaaccccagttgagggccatgag
atgctggaaattcaagtcttcaacttcagcaaagtattcacaaacaagcttctgggcact
ttctgcatggttcttcagcaagtggtggaagatggcgtgctggagatcacggacacactt
cttgacgacaacaacacacccaccaagacagccgtgacggtggaggtgcgcatgcaggag
ggctcgtggagcgacggagacctcctgcagttcgacagccggggcctcgaggatgagggg
ctgctcgccaacccggccaacaacgcaggccgcaagcgaaccacagatgaggaggggggc
agctgctacaatagcgatgaagacgccaactcaagttacagctgtgaggaccattcgcaa
gaagaggatgacaagggagctctcggcaaacttgccggactaaagaccaaggatggttac
agagcattgtcgagtaaatctaagcagggcaagcgctccgccatcaagggcttcagcaag
ggaaccgaaggtgcgaaggccaaggatgcgaaagacaaaggaggaaagccagacaaggct
ggcgtcaaatcagtcttttctggaataaagctggtcaaaacaaagtctccaaaggaccag
aactcatccgctggaaacaagaactcaagtgatgaacctgctgtcatagacaccgaccac
aggcccaagtctggaagggggaaagatttcgatactatgtcaatggcctccatcactgcc
gtcaccaccaatgtgtcgaacaaacgggcaaaaccagatgccaagatggaacccacatct
gggagaccacaagattatcaggtgagcatcacgatcatcgaggctcgtcagctgatgggt
ctcaacatggacccggtggtgtgcgtcgaggtcggggaggagaagaagtacaccagcatg
aaggagtccaccaattgcccctattacaatgagtatttcgtatttgatttccacgtgcct
cctgaagtcctgtttgacaagattgtcaagctctccgtcattcactcacggaacattctg
cgcagcggcacgctggtgggcatgttcaagctggacgtgggcaccgtgtacacccagcca
gagcaccagttctaccacaagtgggcggtgctgtcggacccggacgacatcacatcgggc
gtgaagggctacctgaagtgcgacattgccgtggtggggaagggggacaccatcaagacg
ctgcacaagtccaaggagtcggaggacgaggacgtggatggcaacctcctgctgccggag
ggcgtccctgtggagaggcagtgggcccgcttctacgtgcgcatctaccgcgcagagggc
ctccccaagatgaacaccagcctcatggccaacgtcaaaaaggcgctgacgggcgacgac
aaggacatggtcgacccctacgtctctatctccttcgccgggcagaagggcaagacgtcg
gtacagaagggcagctgcgagcccgtgtggaacgagcaggtcatcttcacggagatgttt
ccgccgctcgtacggcgcatgaagatccagatccgagacagcgacaaggtcaacgacgtg
gccatcggcacgcacttcgtcgacctgaggaagatcgccaacgagggagacaagggtttc
ctgcccacgttcggccccgcgtgggtgaacatgtacggctcgacgcggaactacaccctg
atggacgagcaccaggagctcaacgagggccttggggagggcgtctcgttccgcgcccgc
ctcctcatctccatcgtcatggagttcctggacacctcctcgcccgatgtcaccagctcc
accgacatccagtcggagaccatcccaccgatctctgagaattccacggggaggattgac
gaattcttcctctttggaaccttcctggaagcaacgatgattgaccgcaagattggcgac
aagccgattaacttcgaagtgaccatcggcaactacggcagcctgatcgatgggacggac
aaagctgacccgggcaagaagaagtcggccaacgacgacgaggtggaactcctgtcgcgc
accttcgacgaggagaactttgagtccgacatgggcaccttgtccaccactccgcctcgc
aaacccgtcatcacagacaggaactactaccacctgccctactacgaggagaagccatgc
atccacatcaagagccactggcaagaccagcgctggcgcctctacaactcgaacatcatg
gagagcaccgccgacaagctcgaggagggcatcaacgacgtgcaggagatcatcagcacg
gagaagccgcaccctgagcgccggctgcgtggagtcctggaggagctcagcctgggctgc
ctgcgatttgttgccctggccaaaaaagacaagcagcagaacgggcagacgcggctcgac
aaggagcggctgaaggcctgtacgcacgagctggagacgatggccatgcaggccaagacg
ctgagaatcaacgtgaagcgggcaacactcaaggagaagcttaagcaggcgtacaacttc
ctgcagaagcttcgcttcctcgccgatgagccccagcacagcgtgcccgatgtgtacgtg
tggatgctgagcaacaacaagcgcgtggcatacgcgcgcatctcggccaaggacatcctc
tactcgcccatcgacgacgagatgggcaaggactgcgggaagatcaagaccctcttcctc
cggctgcccgggaagaagagcttcggctccggaggctggacggtgcaggctaagctggag
gcttacttctggctcagcctgcacaaacatcgcaaggacttcatgaacggcttgcccaat
ggctacgagcagaaaaaggccaagaacagcagcccgatcgcacaagccttgccacccatc
agcctcatctataaagaaaagcaaatgttccagctgcgagtccacatgtaccaggcgcgg
agcctcttcgcagccgacagcaccgggctctcggacccgtttggcagaatcatcttctcc
acgcacagccaggccaccgaggtcatcccagagaccttgtgtcccacgtgggaccaaatg
ctggtgttcgacagcattgagctctatggagaagctcaggagctgcgagatgacccaccc
atcatcgtcatcgaggtcttcgaccaggacacgccgtcgaaattgggaggttcggggaag
gcggacttcatcggacgagccttggccaagcccgtggtgaaaatgagcaacgagaagtac
gacgcgccgcgcttccccccgcagctcgactactaccagatctaccgggggaactccact
gcgggagaactgctcgctgccttcgagctcctgcagatcccgccatcgggcaagggagac
ctcccacccatctcgggtccaacagacacggagcatggcaccatccttcccgttccaagg
ggcatccgcccaatcctcagcaagtaccggattgaggtgctcttctggggcctgagggac
ctgaagaggatccagctggtgacggtcgatcgcccgcgtgtggacgtcgaatgctcgggg
aaaagcgtgcagtctgtggtgatccccagctacaagcagaaccccaacttcagcaccctc
ttcaagcattttgaagtggacctaccggacaacgagctgctgcacccgcccctcaacatc
cgcgtggtcgactgccgcgcgttcggccgctacaccctggtgggcacgcacaccgtcacc
tccctgcgcaagttcattctgcgggcgcccagcaagaccaaggccgccaacatccgcacc
atagcaggcgacgcagcgatcaacatggaggagatttctctgcgaaaagcagagaccatg
gtccgcttggatcccaattctgacgcggtggttaaaatcgaatcggttgagtcagaaaag
gactccaagaaaaagaagaagaagaaaggcgtggaagaggaggaggaggacgagccagat
gaggaacttctggactggtggtccaagtactttgtgtccatagagaccctcaaggagcag
caaaagatgcaagaagaaactgaagaagaaaaggagtccgattctggtgaagagcgcaga
agcccaaagatggccggaaaggcaggagcgaaagtcaaggtcggtgaacgggaagagaag
aaggaggtgaaacgccgcatgagggtggaggagctgaagatgttcgacaaggagctggag
gccgaatttgacaatttcgaggactggctgcacacgttcagcctctaccgtgggaagatc
gaggatgacgacagcagcatggaggaggatcggctggtcggcaggttcaagggctcgctg
tgtgtgtacaagtatccccttccggaggagctggcacgggaggtggggtacgacccgcag
ttcggaatgttccaggggatcccaagcaatgaccccatcggggtgctcgtcagggtttac
gtggtccgcgcaaacgatttgcacccagccgacgtgaatggaaaggccgacccctacatc
gtggtcaagctggggaagcacgaggtgaaggacaaggagaactacatctccaaacaactc
aaccccgtctttggaaaatcgtttgacatcgaagccgtgttccccatggactccatgctg
accgtgtccatctatgactgggacctggtcggcacggacgacctaatcggagagaccaag
atagacctggagaatcgcctctacagcaagcatcgtcccacctgtggcatctcccagcga
tacagcatacacggctacaacatgtggagggacccgctgaagcccagccagattctggca
cgcttgtgcaaggaggtgaaggtggacccgccgcagtacagccctgaggggcgtgtcaag
gtcgccaaccgcaccttcactgccgccaccgaggtggaggacgagaacggtcagaagaag
ccaacggatgagcacatggcgctgacggtactgcaccactgggaggagatccccggtgcc
tgcaagctgattcccgagcacatcgagacaaggcctctgctgcacccagagaagcccggc
atcgagcagggtcgtatcgagatgtgggtggacatgtttcccgccgacgtgccgcggccg
ggccctcccatcgacatcgcgcctcgcaagcccaagagcctggagatgcgcgtcatcatt
tggaacaccgatgacgtcattctggaagacgactcgttgctgacgggcgaaaagtcctcc
gatatctttgttcgaagctggctcaaggggcagcaggaggacaagcaggacacggacgtg
cactacaactcggtgacgggcgagggcaacttcaactggcgcttcgtcttccccttcgac
tacctcgtggcggaggagaagatcgttatgtccaagaaggagtcggtgttctcgtgggac
gagactgagtacaagatccccgcacgcctcacgctgcaggtctgggacgccgaccacttc
tccgctgacgacttcctgggtgccatcgagctggacctgaatcgcttcccgcgcggagca
aagacctccaagctgtgctcgctggacatgctcaagacggacggctcggtgcccatgatc
tccatcttcaagcagaagaggatcaagggctggtggcccttcgccgcccgcaacgagaac
gacgagctggagcttacgggaaaagtcgaggcggagattcatctgctgacttcagaggag
gctgagaagagtccagcgggactgggccgcaatgagccagaccctctggaaaaacccaac
cggccagatacgtcattcatgtggttcctcacacctctcagatcgatcaagtacctaatc
tgtcaccgctacaagtggctcattgtcaaaatcgtactggcacttctcctcctggctatg
ttagctctgtttctctacaacatgccaggctacatggttaaaaagttactgggagcttag
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