Lethenteron reissneri (Far Eastern brook lamprey): 133351170
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Entry
133351170 CDS
T09663
Name
(RefSeq) agrin-like
KO
K06254
agrin
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Pathway
lrj04512
ECM-receptor interaction
lrj04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
133351170
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
133351170
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
lrj00535
]
133351170
Proteoglycans [BR:
lrj00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
133351170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_1
Kazal_2
Laminin_G_2
Kazal_1
NtA
Kazal_CFAI
EGF_laminin
SEA
EGF
hEGF
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
133351170
NCBI-ProteinID:
XP_061422149
LinkDB
All DBs
Position
36:12891204..13017003
Genome browser
AA seq
2045 aa
AA seq
DB search
MSPSRYCRWGCPLPAPLLLLLVLLALSGGSHAARLRWFASADCVRGDAALELREEAANVV
LTGTVEEILHRDPVLHTYAGMVRVWRFLKGREILSPSALMDGGRKVMVGGFGEPSICDNQ
VSTGDTRIFLLNPSANELWPEHQELLQLNSSLIRISLRNLEKVELAVQDKPVKDLPQTPP
SVVEVCRPVLCGFGAVCERDPEEPARGVCACRRADCLAVVAPVCGSDGATYANECELERA
QCTQQRRIRVSSRGPCGAREPCSGVACGLGASCVSVPDGSPPRCVCPSSCAGAANASVCG
TDGTTYRSVCDMNKRACETATDIRYKFAGECDPCAAVTPGPDELCRVAPRSREAVLLPPP
ESCPEGDAAAVCGDDGVTYASECHLERAGARAGLRLRRLHGGQCAQHERCPHPCQHGALC
AVSGGVARCSCERIVCDGAFRPLCSADGRTFGNGCERQRAACLEGADVPVEHDGPCKPLL
ASPCQGMRCGTGARCVLKGGAPVCECQAVCPSHVYEPVCGADNHTYASTCELESMACAMQ
RTIGVRHRGACDRCSGCRFGAVCDGEAGRCVCPGVCAGARSPVCGTDGRTYASECDMNVR
ACAEQRHIAVASRGECKTCGGEVCSFGAVCLSGRCSCPPCPPGERGPPVCGSDGRTHPSA
CELRATACRLREALNVTHDGACDDCEEEGGEGGVSGSGSSGDVCLEERCLRFGGQWDDDV
EDSRCLCDFACRSVALSPVCGSDGVTYGSECELKKARCDRQTDLTLARLGLCIREPAPVP
TTSADPVAHCSQSVYGCCPDNQTAALGVGLAGCPSTCACNRHGAYGASCDAATAQCSCKP
GVGGLKCDRCEPSFWNFRGIVVEEQPGCIPCKCDPAGSVRDDCEQMTGRCSCKDGILGPK
CSQCPPGEAMGPAGCREEPTPASCGLLSCRFGAVCVEEGGAARCECPTACSERNLTRVCG
TDGVTYADRCQLFTIACRQGTAISIASHGPCPEPVPPFQVGDPHVGPLLPPPTTGRPPHS
AVVTLPKQAPWTPTTPAARASHTASPHGASTAAIGQQKEDEVEALPPPEEEGSGSNSGDG
SDQEGSGGGGGTASGTATGEGAVKPVPVPAANGSIAERSSCENSAFGCCPDGRTLATDPA
ASTCPATRVVLAQLSIEELEGTETTFGPWLSDPTSEQFAEMRSSTENGLSDMLLHSEVQK
WFRSARVLRFASAPSNGHVQADVELHFDPNSRVSAEAVRRALLKVLRSQRKRGIVVTKPE
HGHVSLLTPATPPPAAATVSSLPAAAATVSAVTRQRAPPPAPPAPSAAPPAAPSAAPSPK
QRRPGPQESDDCATNPCLHWGQCRPEKPSGYTCICPVGRGGAVCEQEVHYHQPAFGGDSF
LAFEPIEAFHTVRVSLLFRSMRPSGLLLYSGQAQVRDFFSIALVNGVVQLRYNLGSGMAV
ITSRLRLQLGRWFRVEVQRTRRTGSLSVEKEVPVEGESPPGSEGLNLDSDLFIGGAPANV
MQTVKQQALVQRGLTGCLTQLLVNDVAYNLQIQGGEVRYGQGIGECGNNPCRPNPCRNKA
VCRMREAEAYQCFCHEGFTGPTCANASSACEPSPCHPASRCLIVPQGGFKCECPLGREGK
LCDRDVAVDKTAAFIPAFNGLTSYIERESLESVSSTHQSKLTLDVSFLSQEKDGMIFYNG
HQTDGRGDFVSLNLVNGFLEFKFDLGKGPAVIRSAERLPLGVWHVVRVQRSGRSGSMTIN
QGRPLTGESPSPHTSLNVKEPFYVGGAPDFKKFARAAAITTGLTGAIQQLSIGGTVVPSL
TEGHRAAVDITNFVQHPCTSGQNPCRNGGQCRPQLELYECLCPRGFSGRTCENALEQRDQ
SDSVAIAFDGKTHVEFYNAIKHSVKSQQNNSLALSVRAGGRPGLLLWQGKAREGSDYLGL
ALSGGRVHFTWYLGSRPGLLSAPLPADSKAWVRIKAWRHQQDGWLQVGDAEAVTGTAAGG
ATQLDTDGALWLGGTAERRRAPRLPPGSTVGLVGCVRDLEVGGHPVDLLADALHRPPLLH
CSSSR
NT seq
6138 nt
NT seq
+upstream
nt +downstream
nt
atgtcgccttcccgctactgccgctgggggtgccccttgccagcaccgctgctgctgctg
ttggtgctgctggcgctgagcggggggagccacgcggcgcggctccgctggttcgccagc
gccgactgcgtgcgcggggacgcggccctcgagctgcgcgaggaggcggccaacgtggtc
ctcacggggaccgtggaggagatcctccacagggaccccgtgctgcacacctacgcgggc
atggtgcgcgtgtggcgcttcctcaagggccgcgagatcctgtccccgagcgcgctcatg
gacggcggccgcaaggtgatggtgggcggcttcggtgagccgagcatctgtgacaaccag
gtgtcgacgggcgacacgcgcatcttcctgctcaacccctccgccaacgagctgtggccc
gagcaccaggagctgctccagctcaactcgagcctcatccgcatctccctgcgcaacctc
gagaaggtggagctcgccgtgcaagataaacccgtaaaggatctgcctcaaacccctccc
agcgtcgtggaagtgtgccgccccgtgctgtgcgggtttggcgcggtgtgcgagcgcgac
cccgaggaaccggcccgcggggtgtgcgcgtgccgccgcgccgactgcctggccgtggtg
gcgcccgtgtgcggctcggacggcgccacctacgccaacgagtgcgagctggagcgcgcc
cagtgcacgcagcagcgccgcatccgcgtcagcagccgcgggccctgcggcgcacgcgag
ccgtgcagtggcgtggcctgcggcctgggcgcctcctgcgtgtcggtgccggacggctcg
ccgccacgctgcgtgtgcccttcctcgtgcgccggcgctgccaacgccagcgtgtgcggc
acggacggcaccacgtaccgcagcgtgtgcgacatgaacaaacgcgcgtgcgagacggcc
accgacatccgctacaagttcgccggggaatgcgacccgtgcgcggccgtgacgccgggc
cccgacgagctgtgccgcgtggcaccgcggtcccgcgaggcggtgctgctgccgccgccg
gagtcgtgccccgagggcgacgcggctgccgtgtgcggggacgacggcgtcacctacgcc
agcgagtgccacttggagcgcgcgggggcgcgggccggcctgaggctgcgcaggctccac
ggcgggcagtgcgcccagcacgagcggtgcccacacccgtgccagcacggcgctctctgc
gcggtctctggcggggtggcgcgctgctcgtgcgagcgcattgtgtgcgacggcgccttc
cgcccgttgtgctccgccgacgggcgcaccttcggcaacggatgcgagcggcagcgcgcc
gcctgcctggagggggccgacgtccccgtggaacacgacgggccctgcaagccgctgctg
gcgagcccgtgccagggcatgcggtgcgggacgggcgctcgctgcgtgctcaagggcggc
gcgccggtgtgcgagtgccaggccgtgtgcccgtcgcacgtttacgagccggtgtgcggc
gccgacaaccacacctacgccagcacctgcgagctcgagagcatggcctgcgccatgcag
cgcaccatcggcgtgcgccaccgcggggcctgcgaccgctgctcgggctgccggttcggc
gcggtgtgcgacggcgaggcggggcgctgcgtgtgccccggcgtgtgcgcgggcgcccgc
agccccgtgtgcggcacggacgggcgcacgtacgcgagcgagtgcgacatgaacgtgcgc
gcgtgcgcggagcagcgccacatcgccgtggcgtcgcgcggcgagtgcaagacgtgcggc
ggcgaggtgtgctcgtttggcgccgtgtgcctgtcggggcgctgctcgtgccccccgtgc
cctccgggggagcgcggcccccccgtgtgcggcagcgacgggcgcacgcaccccagcgcc
tgcgagctgcgcgccacagcctgccgcctgcgcgaggccctcaacgtcacccacgacggc
gcctgcgacgactgtgaggaggaggggggcgagggcggcgtgtcgggctcgggctcgtcg
ggcgacgtgtgcctggaggagcgctgcctgcgcttcgggggccagtgggacgacgacgtg
gaggactcgcgctgcctctgcgacttcgcctgccgcagcgtcgcgctcagcccggtgtgc
ggctcggacggggtgacgtacggcagtgagtgcgagctgaagaaggcgcgctgcgaccgg
cagacggacctcaccttagcacggctcggactctgcatcagggagcctgcccccgttccc
acgacctccgccgaccccgtggcccactgcagccaatcggtgtacggctgctgccccgac
aaccagacagctgccctcggcgtggggctcgctggctgccccagcacgtgcgcgtgtaac
cggcacggcgcgtacggcgcgagctgcgacgcggcgacggcccagtgctcctgcaagccg
ggcgtcgggggcctcaagtgcgaccgctgcgagcccagcttctggaacttccgcggcatc
gtggtggaggagcagcccggatgcataccgtgcaagtgcgacccagccggctccgtgcgg
gacgactgcgagcagatgaccggacgctgctcctgcaaggacggcatcctggggcccaaa
tgcagccagtgcccgcccggggaagccatggggcccgcgggctgccgggaagagccgacc
ccggcctcctgcgggctgctgtcgtgccgcttcggcgccgtgtgcgtggaggagggcggc
gccgctcgctgcgagtgccccaccgcgtgctccgagcgaaacctcaccagggtgtgcggc
acggacggggtgacgtacgccgatcggtgccagctcttcaccatcgcatgccgccagggc
acagccatttccatcgcgtcccacgggccctgcccagagcccgtccccccgttccaagtg
ggggacccccacgtggggccgctgctgcctccccccaccacgggccgccccccccactcc
gcggtggtgacgctgcccaagcaggcgccctggacccccaccaccccggcggccagggcc
tcccacaccgcctccccgcacggcgccagcaccgcggccatagggcagcagaaagaggac
gaggtggaggcgctgcccccaccggaggaggagggcagtggctcgaacagcggcgatggc
tcggaccaggagggcagtggcggcggtggcggcacagccagcggcacggccaccggggaa
ggagcggtgaagccggtccccgtgccggccgccaacggctccatcgcggagcgctcctcc
tgcgagaactccgccttcggctgctgccccgatgggcgcaccctggccaccgaccccgcc
gcctccacctgcccagcgacgcgcgtcgtgctggcccagctgtccatcgaggagctggag
ggcaccgagacgacgttcggaccgtggctctcggacccaacgtccgagcagttcgcggag
atgcggagcagcaccgagaacggcctcagcgacatgctgctgcactcggaggtgcaaaaa
tggttccgcagcgcccgcgtgctccgcttcgcgtctgcgccttccaacggccacgtccag
gccgacgtggagttgcactttgaccccaactcgcgcgtctcggcggaggcggtgcggagg
gcgctgctcaaggtgctgcgctcgcagaggaagagaggcatcgtcgtgacgaagcccgag
cacggacacgtctcgctcctcacgcccgcgacgccgccccctgcggccgccaccgtctcc
tcgctcccggccgcggcggcgaccgtctccgcggtaactcggcagcgcgctcctcctccc
gctcctcccgctccttccgccgctcctccggcggcgccgtccgcggctccgtcaccgaag
cagcggcggcccgggccgcaggagagcgacgactgcgccaccaacccgtgcctccactgg
ggccagtgccgccccgagaagccctcgggttacacctgcatctgccccgtcgggcgtggc
ggcgccgtctgtgaacaagaggtccactaccaccagccggcgttcggtggagattccttc
ctggccttcgaaccgatcgaggccttccacacggtgcgcgtgagcctgctgttccgctcg
atgcggccctcgggcctcctgctctacagcggccaggcgcaagtccgcgacttcttctcg
attgcgctcgtcaacggagtcgtccagctgcggtacaacctgggctcgggcatggcggtg
atcacgagccgcttgaggctgcagctgggccgctggttccgcgtggaagtgcagcgcacc
cggcgcaccggctccctctccgtggagaaggaggtccctgtggagggagagagccccccc
ggctccgagggtctcaacctcgacagcgacctcttcatagggggggcacccgccaacgtc
atgcaaactgtaaagcagcaggcgctggtgcagcggggactcacgggctgcctgactcag
ctgctcgtcaacgacgtcgcctacaacctgcagatccagggcggcgaggtgcggtacggc
cagggcatcggggagtgcggcaacaatccgtgccgccccaacccgtgccgcaacaaggcc
gtgtgccggatgagggaagccgaggcgtaccagtgcttctgccacgaagggttcaccggc
ccgacgtgtgccaacgcgagcagcgcgtgtgagcccagcccgtgccacccggcgtcgcgc
tgcctcattgtgccgcagggcggcttcaagtgcgagtgcccgctggggcgcgagggcaag
ctctgtgaccgagacgtggcggtggacaagaccgcggccttcatcccggccttcaacggc
ctcacgtcgtacatcgagcgcgagagcctggaatccgtcagctccacgcaccagagcaag
ctgacgctggatgtgtccttcctgagccaggagaaggacggcatgatcttctacaacggc
caccagacggacgggcgcggggactttgtgtccctcaacctcgtcaacggcttcctggag
ttcaagttcgacctgggcaagggccccgccgtcatcaggagcgccgagcggctcccgctg
ggcgtgtggcacgtggtgcgtgtgcagcgcagcggccgctccggctccatgaccatcaac
cagggccgcccgctcaccggggaatccccgagcccccacacgtcactcaacgtgaaggag
ccattctacgtcgggggagcgcccgactttaagaagtttgcacgggcggccgccatcacc
acggggctcacaggcgccatccagcagctctcgatcggcggcacggtcgtgccgagcctc
accgaggggcaccgcgccgccgtggacatcaccaacttcgtgcagcacccgtgcacgtcc
ggccagaacccgtgccgcaacggcgggcagtgccggccccagctggagctctacgagtgc
ctgtgtccgcgcgggttctccggccgcacctgtgaaaacgccctggagcagcgggatcag
agcgacagcgtcgcgattgcgttcgatgggaaaactcacgtggagttttacaacgcaatc
aagcacagcgtgaagtcgcagcagaacaactcgctggcgctgagcgtgcgcgccggcggc
aggccgggcctgctgctgtggcagggcaaggcccgcgagggctccgattacctgggcctc
gcgctgagcggcggccgcgtgcacttcacctggtacctgggctcccgcccgggcctgctg
tccgccccgctgcccgccgactccaaggcctgggtccgcatcaaggcctggaggcaccag
caggacgggtggctgcaggtcggagacgcggaggccgtgacggggacggccgcgggcgga
gccacgcagctcgacacggacggggccctctggctcggcggtacggcggagcggcgccgt
gcgccgcgcctgccgcccggctccaccgtgggcctcgtgggctgcgtgcgcgacctcgag
gtggggggccaccccgtggacctcctcgctgacgccctccaccggcccccgctgctccac
tgctcctcctcgcgctga
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