Lethenteron reissneri (Far Eastern brook lamprey): 133351437
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Entry
133351437 CDS
T09663
Name
(RefSeq) LOW QUALITY PROTEIN: transient receptor potential cation channel subfamily M member 5-like
KO
K04979
transient receptor potential cation channel subfamily M member 4
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lrj04040
]
133351437
Ion channels [BR:
lrj04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
133351437
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Gene cluster
GFIT
Motif
Pfam:
LSDAT_euk
LSDAT_prok
Ion_trans
Motif
Other DBs
NCBI-GeneID:
133351437
NCBI-ProteinID:
XP_061422630
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Position
37:complement(2332923..2382545)
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AA seq
1243 aa
AA seq
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MASLGPQDEGWIGRNIRIPVCSAYVADIELAHNGRATCQCGSSMALHTHLAQQNNTHPDD
TVWNPDLHTSDEPTDAYGDFICQGLGKSQRKYTRVSYKTSADLLYNVLTRIWGLRTPNLV
MSVVGGESNFQLKPWVRDVLRTGLMRAVQSTGAWLITGGLHTGVMRHIGEAVSEHSMART
PAEHKVVAIGIVPWGQLAGRKALLNKRGLRKEYTVPGWERPLLPLDKNHSHFLLVDDGST
GKRSTRVHTLRVHLERFIAKQKTMHGGTGCIEIPVLYVLIGGELEVLKTVQDAVVNGTPC
LVLGGSGGIADIITAVVSVSPDEITAEMVATHHHAAFPNEDELSGEQLDKWTDVIKSIVE
QSNMLTALTEEEHEVAEPMDTVILKSLFKACRGKSHEAAEYKDELNLALAWNQMDIAKSE
IFNGNIAWKAKDLEESMHVALVSDKPDFVKLFVENGVNIGAFLTVKRLQQLYRAAAPKSV
LHKLLSDKLARRKDDKGGSFLFGKNDDDDDDEDGGSNEADAAATMAEDEANGGPLSGSNP
DVVRKPGFTMHDVSLVLHDFLGDVCEPIYQGSTEKSSLKTLFKSKVKEVEQAYMDETDSP
TYEEDSTRPKMYPYRDLFIWAVLQNRRQMALYFWEMGQNSVASMLAAMRILKGLSRLEVE
AEAAREMKDFMVMCENMSVAVLNECYRTSQARTFKLLVRQSPSWGNATCLQLASEANAEA
FFSHSAAQDLLNDIWWGDMSNETDIWKIFAVFFCPPLLYCNLIEFSELSIQKPSALEMDS
VPDGENPMLSLLQKLDEKDIEGVTTSVRERYTCSRRWTRFWGAPIIVFLGNVVTYFMFLF
LFAYVLLVDFRPPPVGPRGPEIFLYFWVFTLVCEEIRQSFHKVGNISLVHSLKQYIEDFW
NKCDIIAISLFILGLILRMFPSRFNDGRVVFCLDYMVFAMRLIHIFAVHKQLGPKIIIVG
GMIKDVFFFLFILGIWLIAYGVATEGLLHPDDTRLDWTFRRVLYRPYLQIFGQIPLDEMD
AVKILNCTDDSMEGMMGSNAACPNTYANWIVILLLVIFLLVTNVLLLNLLIAMFSYTFSQ
VQGNSDKIWRFQRYNLIVEYHDRPSLAPPFIIISHIKHLVRKFVFKATAEKHKHFMQSLQ
EDVDQRLMVWEGIQKVNYLTDTILHKRDCSEERLKRTSKKLDMVLKLAQDIQVQERRLNS
LDAQYEQMRYCAKALSWLIEAQKETNKDFTMVPPVCPDLGEAK
NT seq
3732 nt
NT seq
+upstream
nt +downstream
nt
atggcgagtctgggccctcaagacgagggctggatcgggaggaacattcggatccccgtg
tgcagcgcgtacgttgctgacatcgagctggcacacaatgggcgggcgacatgtcagtgc
ggctcctccatggctctgcacactcacttggcgcagcagaacaacactcaccccgacgac
accgtgtggaatcccgacctgcacaccagcgacgagcccacggacgcctacggcgacttc
atctgccagggtctgggcaagtcccagcgcaagtacacacgggtgtcatacaagacgagc
gcggacctgctgtacaacgtgctcacgcgcatctgggggctgcgcacgcccaacctggtg
atgtccgtcgtgggcggggagtccaacttccagctgaagccgtgggtgcgtgatgtcctg
cgcacgggcctcatgcgcgctgtgcagagcacaggcgcgtggctcatcacgggcggcctg
cacacgggcgtgatgcgccacatcggcgaggcggtgagcgagcactcgatggctcgcacg
cccgctgagcacaaggtggtggccatcggcatcgtgccgtgggggcagctcgctgggcgc
aaggcgctgctcaacaagcggggtctccggaaggagtacacggtgccaggctgggagcgg
cctctgctgccgctggacaagaaccactcgcacttcctgctcgtggacgacggcagcacg
ggcaagcggtcgacgcgcgtgcacacgctgcgcgtgcaccttgagcggttcatcgccaag
cagaagacgatgcacggtgggacgggctgcatcgagatcccggtgctctacgtgctgatc
ggcggcgagctggaggtgctcaagacggtgcaggacgcggtggtgaacgggacgccctgc
ctcgtgctgggcggctccggtggcatcgccgacatcatcacggcggtggtgtccgtgtcc
cccgatgagatcaccgccgagatggtggccacccaccaccacgcggccttccccaacgag
gacgagctgagcggcgagcagctcgacaagtggaccgacgtgataaagagcatcgtggag
cagtccaacatgctgacggcgctcactgaggaggagcatgaggtcgcggagcccatggac
accgtgatcctcaagtcgctcttcaaagcgtgccgcggtaagagccacgaggcggccgaa
tacaaggacgagctgaacctggcgctcgcctggaaccagatggacatcgccaagagcgag
atcttcaacggcaacatcgcgtggaaggcgaaggacctggaggagtcgatgcacgtggcg
ctggtgagcgacaaacccgacttcgtgaagctcttcgtcgagaacggcgtcaacatcggc
gccttcctcacggtgaagcggctgcagcagctgtaccgtgccgcagcacccaagagcgtc
ctgcacaagctgctaagcgacaagctggcgcgccggaaggatgataaggggggatccttc
ctcttcgggaaaaacgacgatgacgacgacgacgaagacggcggcagcaatgaagccgac
gcggccgccacgatggcagaggacgaggccaacggcggcccgctgagcggcagcaatccg
gacgtggtccgcaagccgggcttcacgatgcacgatgtgtcgctggtgctgcacgacttc
ctgggcgatgtgtgcgagccgatctaccagggctccacggagaagagctcgctgaagacc
ctgttcaagagcaaggtgaaggaagtggagcaggcttacatggacgagaccgactcgcca
acctatgaagaggattccacgaggccaaagatgtacccgtacagggacctcttcatctgg
gccgtgctccagaaccggaggcaaatggcactctatttctgggaaatgggccagaactcg
gtggcgtccatgttggccgccatgcgcatcctcaagggactgtcgcgcctggaggtcgag
gccgaggcggcgcgggagatgaaggacttcatggtgatgtgcgagaacatgtctgtcgcc
gtgctcaacgagtgctaccggacgagccaggcgcgcaccttcaagctgctcgtgcggcag
agcccatcctggggcaacgccacgtgcctgcagctcgcctccgaggccaacgccgaggcc
ttctttagccacagcgccgcgcaggacctcctcaacgacatctggtggggagacatgtcc
aacgagactgacatctggaagattttcgccgtgttcttctgtcctccgctgctctactgc
aacctcatcgagttcagcgagctcagcatacagaagccgtcggcgttggagatggacagc
gtcccagacggggagaaccccatgctgagcctgctgcagaaactggacgaaaaggacatc
gagggagtgaccacgtcggtgagggagcgctacacctgcagccgccgctggacgcgcttc
tggggggcgcccatcatcgtgttcctcggcaacgtcgtcacctacttcatgttcctcttc
ctcttcgcgtacgtgctgctcgtcgacttccgccccccgcccgtaggcccgcgggggccc
gagatcttcctctacttctgggtcttcacgctcgtgtgcgaggagatacgccagagcttc
cacaaggtcggcaacatctcgctcgtgcactcgctcaagcagtacatcgaagacttctgg
aacaagtgtgacatcatcgccatttccctcttcatccttggcctcatattgcggatgttc
ccgtcccggtttaacgatggccgagtcgtcttctgcctcgactacatggtgttcgccatg
aggctcatccacatattcgccgttcataagcagctgggacccaagatcatcatcgtgggg
ggcatgatcaaggacgtgtttttcttcctcttcatcctgggcatctggctgatcgcgtac
ggcgtggccaccgagggcctgctgcaccccgacgacacgcgcctcgactggaccttccgc
cgcgtcctctaccgcccatacctgcagatcttcgggcagatcccgctcgacgagatggac
gccgtgaagatcttgaactgcacggacgactcgatggaaggcatgatggggagcaacgcg
gcgtgccccaacacctacgccaactggatcgtcatcctcctcctcgtcatctttctgctc
gtcaccaacgtcctgctgctcaatctgctcatcgccatgtttagttacaccttctcacag
gtgcaggggaacagcgacaagatctggcgcttccagaggtacaacctgatcgtggagtac
cacgaccggccctccctcgcgccgcccttcatcatcatcagccacatcaagcacctcgtg
cgcaagttcgtcttcaaagccactgccgagaagcacaagcacttcatgcagtcgctgcag
gaggacgtggaccagcgactcatggtgtgggagggcatccagaaggtcaactacctgacc
gacaccatccttcataagcgcgactgcagcgaggagcgcctcaagaggacgtcgaagaag
ctggacatggtgctcaagctggcacaggacatccaggtccaggagcggagactcaacagc
cttgacgcccagtacgagcagatgagatactgcgccaaggcgctgtcatggctcatcgaa
gcccagaaggaaacgaacaaagactttaccatggtgccgccggtgtgtccagacttgggc
gaggcgaagtga
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