Lethenteron reissneri (Far Eastern brook lamprey): 133351906
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Entry
133351906 CDS
T09663
Symbol
C9orf72
Name
(RefSeq) guanine nucleotide exchange factor C9orf72 homolog
KO
K23609
guanine nucleotide exchange protein C9orf72
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Pathway
lrj04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
133351906 (C9orf72)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lrj04131
]
133351906 (C9orf72)
Membrane trafficking [BR:
lrj04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
133351906 (C9orf72)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C9orf72-like
TT_ORF2-like
Motif
Other DBs
NCBI-GeneID:
133351906
NCBI-ProteinID:
XP_061423479
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All DBs
Position
39:2819014..2827608
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AA seq
460 aa
AA seq
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MMSGPVDMCAPHSPTLVPIMLDVGSADPLQAATLAYWDNILGPRVHNLWLVGDPASDRDV
MRESEFCLLSTHTLNGEVLRSAPDGAADVKLYELAERGACVSSLVFDAPRWRGRQQQGVL
ALALVMRLAPRPLCVRAHTLAAARLAHATRVLRVLMYKDSDNIVQFLTGELTSIAKLFVS
LNSHGVPDSISLKDTYFEDNPEEEKRNIISSVVRSHLQTCGCSIVIGSDPREVNKMVKTL
CLFLSPAERRCSRLADPEAKDKYEYGLVVQGLLKDKDGILTLPFRSVVLAPMPSSLVDVD
RPYSVFQTPPKHVHVFRQHKLLRSELVRYWSDPTQLCAPSPIQDINYFQEVPVPDTLVST
FINEVFMVDVGERLPFLARFVLLLQRKALALLFHIEDETQQGKKPLQSLGKVKKELDLTD
KGDLSVVMATAEQMRPGVHSFLFGRQVESTLLEQDTLASF
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgatgagtggtccggtcgacatgtgcgccccgcactccccaacgctggtgcccataatg
ctggatgtgggctccgctgaccccctgcaagctgccaccctcgcctactgggacaacatc
ctgggccctcgcgtgcacaacctctggcttgtcggcgacccggcgtcggatcgcgacgtg
atgcgcgagtcggagttctgcctgctgtcgacgcacaccctgaacggcgaggtgctgcgc
agcgcccccgacggcgccgccgacgtgaagctgtacgagctggcggagcgcggtgcctgc
gtctcctcgctcgtgttcgacgccccgcgctggcggggccgccagcagcagggcgtgctg
gcgctggcgctcgtgatgaggcttgcgccgcgcccgctgtgcgtgcgggcgcacacgctc
gccgcggcacggctcgcgcacgccacgcgcgtgctgcgtgtgctcatgtacaaggactcg
gacaatatcgtgcagttcttgactggggagctaacctccatcgccaagctgtttgtctcg
ctcaacagccacggcgtgcctgacagcatctccctgaaggatacgtactttgaggacaac
cctgaggaagaaaaacggaacattatttccagcgtggtgaggtctcacctacagacgtgc
ggctgctccatcgtcatcggctcagacccgcgagaggttaacaagatggtgaagacgctg
tgtctcttcctgagcccggcagagcggcgctgctcgcgtttggccgatcctgaagccaag
gacaagtacgagtatggcctggtggtgcagggactcctaaaggacaaggatggcatcttg
acactgcccttccgttccgtggtgctggcgcccatgccaagctcgttggtggacgtggac
aggccgtacagcgtgttccagacgccaccgaaacacgtgcacgtcttccggcagcacaag
ctgttgcgcagcgagctcgtgcgctactggagcgaccccacacagctctgcgccccgtcg
cccatccaggacataaattactttcaagaggttcctgtcccggacacgctggtcagcacc
ttcattaacgaggtattcatggttgacgttggcgagcggctaccgttcctcgcgcgcttt
gtgctcctgctgcagcgcaaggcgctggctctgctcttccacatcgaggatgagacgcag
caggggaagaagccgctgcaatcgctggggaaggttaagaaggagctggacctgaccgac
aagggtgacctcagtgtggtgatggctacagcggagcagatgaggccgggcgtgcacagt
ttcctgttcgggcgccaggtggaaagcaccctcctggagcaagacacccttgccagtttc
tga
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