Lethenteron reissneri (Far Eastern brook lamprey): 133352344
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Entry
133352344 CDS
T09663
Name
(RefSeq) G/T mismatch-specific thymine DNA glycosylase-like isoform X1
KO
K20813
thymine-DNA glycosylase [EC:
3.2.2.29
]
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Pathway
lrj03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
133352344
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lrj03400
]
133352344
Enzymes [BR:
lrj01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.29 thymine-DNA glycosylase
133352344
DNA repair and recombination proteins [BR:
lrj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
133352344
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-GeneID:
133352344
NCBI-ProteinID:
XP_061423922
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All DBs
Position
40:7114607..7132838
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AA seq
506 aa
AA seq
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MDAVLPAGNEAPAFGWLNAADPQVLQMQYQRLLAAGMSHHAAGSLVWSGQHSPESPHGAD
QPAHEPAYTQLQNAQPAHCPDFAGRPQAEGTLPKPANPVPVGRGRKRAAPKEPKAPKPPK
APKEPKPPKPPKEPKAPKPPKEPKPPKEPKPPKEPKPPKEPKPPKEPKPPKEPKPPKEKG
RPGRKPGSGKQEKITDTFQKVKRKVDRFNGVSEAELLLKTLPDILTFNLDIVIIGINPGL
MAAYKGHHYPGPGNHFWKCLFLSGLTDQLLNHLDDKSLPEKYGIGFTNMVERTTPGSKDL
KSKEIREGGKILLQKLQKFKPTIAVFNGKCIFEIFFKEVFGEKIKNFQFGEQPNKIPETD
IIVYVMPSSSARCAQFPRAQDKVHFYIKMKELRNSTKGVTPNEEIQETEYTFDLHKAKED
AKLMAIKEEKHDPGYDAAYGGAPNESEQSTSCNYAQLQPADVSMDSPQQMQDDCPGGGWI
IPQFEGQGMDVPGLPPAPQATPQNPV
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atggacgctgtgttacctgcgggtaacgaggcccctgcctttggctggctaaacgcagcg
gacccgcaggtgttgcagatgcagtaccaacgactgttggcggccggcatgagccatcac
gccgccggctccctcgtgtggagcggccagcactcgccggagtctccgcacggagcagac
caaccagcacacgaaccggcttacacgcaactacagaacgcgcagccggcgcattgtccg
gactttgcggggcggccacaagccgaaggcactcttcccaagccggccaaccccgttcct
gttggcagaggacgcaagagggcggctccaaaagaaccaaaagcaccaaagcctccgaag
gcacccaaggaaccaaaacccccaaagccacccaaggagcccaaagcaccgaagcccccc
aaggagcccaagccccccaaggagcccaagccccccaaggagcccaagccccccaaggag
cccaagccccccaaggagcccaagccgcccaaggagccgaagccacccaaggagaaggga
cggcccgggaggaaacctggcagcggcaagcaggagaagattacggacacgtttcagaag
gtgaagcggaaggtggatcgattcaacggtgtctcggaggcggagctactgctgaagact
ctgccagacatcctcaccttcaacctcgacattgtcattattggcatcaaccctggcctg
atggcagcctataaggggcatcactaccctggaccaggaaaccatttctggaagtgccta
ttcctgtctggactcacagaccagcttctcaaccatcttgatgacaagtcgctgccagaa
aaatatggcattggattcaccaacatggtggagcggaccacgccaggcagcaaagatctc
aagagtaaggagatcagggaaggagggaagattcttttgcagaagttgcaaaagttcaag
ccgactatcgcagtcttcaacgggaaatgcatttttgaaattttcttcaaggaagttttt
ggagagaagataaaaaattttcagtttggtgagcaaccaaacaagatccctgaaacggac
attatcgtgtacgtgatgccctcgtccagcgctcgctgtgcccagttcccgcgcgcccag
gacaaggttcacttctacatcaagatgaaggagctgaggaacagcacgaagggcgtcaca
cccaatgaagagatccaggagacggagtacaccttcgacctgcacaaagctaaagaggat
gccaagttgatggccatcaaggaggagaagcacgacccaggatacgacgcggcttatgga
ggagcacctaacgagtcggaacagagcacgtcctgcaactacgcgcagctccagccagcg
gacgtctccatggactctccgcaacaaatgcaggacgattgcccgggtggcggctggata
atcccgcagttcgaggggcagggcatggacgtgcccggactcccgcctgccccgcaagcc
accccccagaacccagtttga
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