Lethenteron reissneri (Far Eastern brook lamprey): 133353942
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Entry
133353942 CDS
T09663
Symbol
RIGI
Name
(RefSeq) antiviral innate immune response receptor RIG-I
KO
K12646
ATP-dependent RNA helicase DDX58 [EC:
5.6.2.6
]
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Pathway
lrj04622
RIG-I-like receptor signaling pathway
lrj04623
Cytosolic DNA-sensing pathway
lrj05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
133353942 (RIGI)
04623 Cytosolic DNA-sensing pathway
133353942 (RIGI)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
133353942 (RIGI)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
lrj04054
]
133353942 (RIGI)
Enzymes [BR:
lrj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
133353942 (RIGI)
Pattern recognition receptors [BR:
lrj04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
133353942 (RIGI)
BRITE hierarchy
Motif
Pfam:
RIG-I_C
RIG-I_C-RD
DEAD
ResIII
Helicase_C
AAA_19
AAA_25
Motif
Other DBs
NCBI-GeneID:
133353942
NCBI-ProteinID:
XP_061426450
LinkDB
All DBs
Position
45:7031776..7066448
Genome browser
AA seq
728 aa
AA seq
DB search
MNVDDKESALAKPAEQVISIDEPKSVMCGNVSLRQYQAELAESALKGENSIIVAPTDSGK
TFVALAICDEHLKQRSGKGPKVIFLAPTLPVFQQQYERFRKHYQDESNMVSVGRVAGGAE
APEPLDLQLMNNDVLIMTPQTLLNGLEKTKVCAITDFSLIIFDECHHTCKNHPYNVIMQH
YLRVKHGPSAQPLPQIVGLTASVGVGENKSLKGAIDHILMLCANMDACVISTVRRNLKEL
AQFVPIAQHNILQVGRRRADPFADIIKDIMAKVEDLLFSLNLPDSGPELKKGNECGTQQY
EQWVIQVQREGSKISIADDKELEQKLCWSIFSCTSHLRKYNDALFINEDTRAKDAMNYLQ
KFFASMDSKGFIDIDETLVNFFKEKLCDLESCLNNPENENPKLLKLEEILRSEYRINAAT
KSILFVKTRAISEAMESWINEIQTELPHLKPSKLIGRAKSKQHEGMTLNQQSGAVHEFRE
EQGSNLLIATSVADEGLDIQRCNLVLLYDYVGNVIKSVQTRGRGRAENSKCMLITTLKGG
LAEKEKVNLLMEKVMYTAIENVQKLDYGTRAEKMESLQKATLSSAEFQRMLQGFKKPEGD
IYLLKCIKCKELVCKSSDIRLVENTHYTVISSAFMEMVVQNPHKKPVCFDGISKIGKIQH
KKCTKDWGIMAIYKGLQFPFIKIQSFIFKKENSDVQLVLNKWRDFPGIISVLSVEEIGQI
GENVLLAE
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgaacgttgatgacaaagaatctgcactcgcaaaaccagcggaacaagtgatatcaatt
gatgagcccaagtctgtgatgtgtggaaatgtatcgctacgacagtatcaggctgaactc
gcagagtctgctctcaagggagagaactccatcatcgttgcccctacagacagtggcaag
acgtttgtggctttggcaatctgtgacgagcacctgaagcagcgctccggaaaaggcccg
aaggtgatctttctggcaccgacactgcctgtgttccaacaacaatacgaacgcttccgc
aagcactatcaggacgagagcaacatggtgtccgtgggccgcgtggctggaggagccgaa
gcccccgagcccctagatctgcagctgatgaacaatgacgttctgatcatgacaccgcag
acactgctcaatgggctcgagaaaacaaaggtttgcgccatcacggatttcagcctcatc
atcttcgacgagtgccaccacacctgtaagaaccacccctacaacgtaatcatgcagcat
tacctcagggtcaagcatggacccagtgctcaaccactgccacagatcgtgggccttaca
gcctctgtcggagttggagaaaataagagcttgaaaggggcaattgatcatatcttaatg
ctgtgcgccaacatggatgcttgtgtcatatccactgttcggaggaatctcaaagagctc
gctcagtttgtgcccatagcacagcacaatatcctacaggttgggagacgtcgtgccgac
ccatttgcagacatcatcaaagatattatggccaaagtggaggacctcttattttccctg
aacttaccagattcggggcccgagctgaagaaaggaaacgaatgcggcacacagcagtat
gagcagtgggtgatacaagtgcagagggaggggagcaagatctccattgcggacgacaag
gagctggagcagaaattgtgctggtccatcttctcgtgcacaagccacctgcggaagtac
aatgacgctttgtttattaatgaggatacaagagctaaggatgcaatgaactatcttcag
aaattctttgcatcgatggattctaaaggtttcattgacatagatgaaacactcgtcaac
ttttttaaagaaaagctttgcgatctggagtcatgtctgaacaatcctgaaaatgaaaat
ccgaagctcctcaaactggaggaaatactgcggagcgaataccggatcaatgctgcaacc
aaatccatcctctttgtgaaaacacgtgccatctccgaggcaatggagagttggatcaat
gaaattcaaacagagttgcctcatctcaagccctccaagctcataggacgggctaaaagc
aaacaacatgaaggaatgactctaaatcagcagtcgggggctgtgcacgaattccgagag
gagcagggaagcaatctgctcatcgcaacgagcgtggcggacgagggccttgacatccag
cgctgcaacctggtgctgctgtacgactacgtgggcaatgtcatcaagagcgtgcaaact
cgcggacgaggccgcgcagaaaacagcaagtgtatgctgatcaccaccttgaagggtggc
ctggcagaaaaagagaaggtgaaccttctgatggagaaggtcatgtacaccgctatcgag
aatgtacagaagcttgactatggcaccagggctgaaaagatggaaagcttgcaaaaggcc
accctgagttctgccgaatttcagcgcatgctgcagggatttaaaaagccagagggagac
atctacttgctgaaatgcatcaagtgcaaagaactagtctgcaaatcaagcgacatccgc
ttagttgagaatacacactacactgtgatttcttctgccttcatggagatggtagtccaa
aacccccacaaaaaacctgtgtgttttgatggaatcagcaagattggaaaaatccagcat
aagaaatgcacgaaagattgggggataatggccatctacaagggcttgcagtttcccttc
atcaagatccagagcttcattttcaagaaggagaatagcgacgttcagctcgtcctcaac
aagtggagagattttccaggaataatttcagtgctctctgttgaggaaattggacagatc
ggggaaaatgtccttttggctgagtaa
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