Lethenteron reissneri (Far Eastern brook lamprey): 133356809
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Entry
133356809 CDS
T09663
Name
(RefSeq) voltage-dependent L-type calcium channel subunit alpha-1D-like
KO
K04850
voltage-dependent calcium channel L type alpha-1C
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Pathway
lrj04010
MAPK signaling pathway
lrj04020
Calcium signaling pathway
lrj04260
Cardiac muscle contraction
lrj04261
Adrenergic signaling in cardiomyocytes
lrj04270
Vascular smooth muscle contraction
lrj04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
133356809
04020 Calcium signaling pathway
133356809
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
133356809
09153 Circulatory system
04260 Cardiac muscle contraction
133356809
04261 Adrenergic signaling in cardiomyocytes
133356809
04270 Vascular smooth muscle contraction
133356809
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lrj04040
]
133356809
Ion channels [BR:
lrj04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
133356809
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
CHCH
LSU
Motif
Other DBs
NCBI-GeneID:
133356809
NCBI-ProteinID:
XP_061430489
LinkDB
All DBs
Position
55:complement(8079771..8142675)
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AA seq
1819 aa
AA seq
DB search
MANKLLGFVQRMRGKKVASAAKEDDSDAAFHGKVVSIGLLKSKYLQSSPPSQGGTSKATP
LTWQAAIRIAREEEERMGRARKAAGPTGDGGAAGSTRAARSLFCLSLQNPMRRACISIVE
WRPFDVLILLTIFSNCVALAVYVPFPDDDTSSANLSLEKLEFVFLIIFTVEAVLKVVADG
LVFHPKAYLRNCWNLLDFVIVLVGLFSAVLEQVSRAGVVPGSHAGKSGGFDVKALRAFRV
LRPLRLVSGVPSLQVVLNSIIKAMVPLLHIGLLVLFFIIIYAIIGLELFMGKMHKTCYYT
GTGLLADDEEVVAPCAFAGSGRQCARNGTECRSDWAGPNDGVTNFDSFGFAMLTVFQCIT
LEGWTDVLYWVNDAVGNDWPWIYFVNLIIVGSFFVLNLVLGVLSGEFSKEREKAKARGDF
QKLREKQKLDGDLRGYLDWIRQAEDIEMERDGTSSGSKCSSEASVHSDTAGSSGERAPLW
VRLGDIILKSQISRWWRRWNRLGRRRCRAVVRSPSFFWLVIVLVFINTLSIASEHHQQAA
WLSHMQDLANKVLLTLFSLEMLVKMYGLGLHVYFTSLFNRFDCFVVCGGIAEAVLVGQGF
VAPLGVSVLRCVRLLRIFKVTRYWNALSNLVVSLLNSMRSIASLLLLLFLFIIIFSLLGM
QLFGGKFNFDSTQLHRSSFDSFPIALLTVFQILTGEDWNTVMYNGIRAYGGPSFPGILVC
VFFIILFICGNYILLNVFLAIAVDNLADAESLTSAQKEAEEERERKKTARAANAEKPKNE
LADAAETETQGGALDAAAKAVGARVDPRGHVQGPSHSATHPPGNGTDDDGDGGVVEEEGS
AARPRPLRLSELRLPERQQSVPRSSSFFIFGSANPVRVFCFRVVNRLTFANFILAVIILS
SLALGAEDPIQPHSLRNQILGYADYLFTGIFTLEILMKLTAYGAFLHKGSFCRSCFNLLD
LLVVGVSLLSFGMQSSAISVVKILRVLRVLRPLRAINRAKGLKHVVQCVFVALRTIGNIL
LVTTLLQFIFACVGVQLFKGKLFSCTDQSKHNPSECRGYFVVVREHGPPVAVRREWQNSE
YNFDDVLSGMLTLFTVSTFEGWPGLLYKAIDSRAEDLGPAHNHRLAVSIFFIVYIIIIAF
FMMNIFVGFVIITFQAQGEQEFENCELDKNQRKCVEYALKARPLKRQMPAGARQRWVWSI
VTSTPFEYLMFVLILLNTLCLASQHHGQSKGFSRFMDICNVIFTVLFALEMLLKLIAFQL
KGYFSDPWNTFDFLIVVGSVIDVVVNEQELLLLCCKFPSTTAGALLRDPHAGVEEERHRF
SITFFRLFRVLRLVKLLSRGEGIRTLLWTFLKSFQALPYVSLLIAMLFFIYAVIGMQLFG
RIALQDGTHINRNNHFQTFLQSILLLFRCATGEAWQEIMLACMPGQRCHPGLGLPRHEAF
SCGSSFSVLYFVSFFMLCAFLIINLFVAVIMDNFDYLTRDWSILGPHHLDEFKRCWAEYD
PEATGRIKHVDLVMLLRHIQPPLGFGKLCPQRVACKRLVMMNMPLGGDGTVRFNATLFAL
VRTSLKIKTEGNVDQANEEMRAIVKKLWKRTNVALLDQVVPPAGDDEVTVGMFYASFLIQ
DYFRKFRQRKEQGTFSNAVMLRAGLRSRQELTPTVKRAISGTIPGEDDQDSADEEMEEVG
DEEEGQALMRVTAGGDPEARRSGDSVPPAQRRPLLLPPPPLARGRVRSRPRDGVLPRGPR
RSRARRPRAAADAADAAVVGGGGAPGESTARAGGGGESRGAAGTRAVPPSDGDEAEMTYH
PSWSLRVAAAPGDPCPGHV
NT seq
5460 nt
NT seq
+upstream
nt +downstream
nt
atggccaacaagctcctgggcttcgtccagcgaatgagggggaagaaggtggcgtcggcg
gcgaaggaggacgactcggacgccgccttccacgggaaggtggtcagcattgggctccta
aagagcaagtacctgcagagctccccaccgtcgcagggtggcacatcaaaggccacgccg
ctcacgtggcaagctgccatccgcatcgcccgcgaggaggaggagcgcatggggcgggcg
cgcaaggccgccggtcctaccggcgacggcggcgcggccgggagcacgcgggcggctcga
tcgctcttctgcctctccctgcaaaacccgatgcgcagggcgtgcatcagcatcgtggag
tggcggccgttcgacgttctcatcctgctcaccatcttcagcaactgcgtggcgctcgcc
gtgtacgtgcccttccccgacgacgacacgagctcggcaaacctgagcctggagaagttg
gagtttgtcttcctgatcatcttcacggtagaggccgtgttgaaggtggtggccgatggc
ctggtgtttcacccgaaagcgtatctgcgaaactgctggaacctcctggactttgtcatt
gtgcttgtcgggctgttcagcgccgtgctggagcaggtgtcgcgtgccggggtggtgccg
ggctcgcacgccgggaagagcggcggcttcgatgtgaaggcgctgcgagcgttccgcgtg
ctgcgccccctgcgtctcgtgtccggcgtgcccagcctccaggtggtgctcaactccatc
atcaaggccatggtgccgctgctgcacatcggcctcctcgtgctcttcttcatcatcatc
tacgccatcatcggcttggagctcttcatgggcaagatgcacaagacgtgctactacacg
ggcacagggctgctggccgacgacgaggaggtcgtggcgccctgcgcgttcgccggcagc
ggacggcagtgcgcgaggaacggcaccgagtgccggtcggactgggcgggccccaacgac
ggggtcaccaacttcgacagcttcggcttcgccatgctcaccgtgttccagtgcatcacg
ctcgagggctggaccgacgtgctctactgggtgaacgacgcggtggggaacgattggccg
tggatttacttcgtgaacctcatcatcgtggggtcgttcttcgtgctgaacctggtgctg
ggggtactgagcggtgagttctccaaggagcgcgagaaggcgaaggcgcgcggcgacttc
cagaaactccgagagaagcagaaactggatggcgacctgcgcggttacctggactggatc
cggcaagcggaggacatcgagatggagcgcgacggcacctcaagcggaagcaagtgttcg
agcgaagcctcggtccattcggacaccgccgggagctctggagagagggcgcccctgtgg
gtccgtctcggggacatcattttgaagtcgcaaatcagccgctggtggcgccggtggaac
cggctgggccgccgccggtgccgtgcggtggtgaggtcgccgtccttcttctggctcgtc
atcgtcctcgtgttcatcaacacgctctccatcgcctccgagcatcaccagcaggccgcg
tggctctcccacatgcaggacctggcgaacaaggtgttgctcacgctcttctcgctggag
atgctcgtgaagatgtacggcctgggcctgcacgtctacttcacgtcgctcttcaaccgc
ttcgactgcttcgtggtgtgcggcggcatcgcggaggccgtgctcgtcggccagggtttt
gtcgcgccgctcggcgtctccgtgctgcgctgcgtgcgtctgctgcgcatcttcaaggtc
accaggtactggaacgccctcagcaacctcgtggtgtcgctgctcaactcgatgcgctcc
atcgcctcgctgctgctgctcctcttcctcttcatcatcatcttctcgctgctcggcatg
cagctgttcggaggaaagttcaacttcgactcgacgcaactccaccgcagctccttcgac
tcgttccccatcgcgctgctcaccgtcttccagatcctcactggggaagactggaacacg
gtgatgtacaacgggatccgtgcctacgggggcccctccttccccggcatcctcgtctgc
gtgttcttcatcatcctcttcatctgcgggaactacattctgctcaacgtgttcctggcc
atcgccgtggacaacctggcggacgccgagagcctcacgtcggctcagaaggaggccgag
gaggagcgggagaggaagaagacggcgagggcggcgaacgcggagaagccgaagaacgag
ctcgcggacgcggcggagacggagacacagggcggtgcactggatgctgcagctaaggct
gttggagcgagagtggatcccagaggacacgtgcaaggaccctcacattctgctacacac
cccccaggcaacgggacggacgacgatggcgacggtggcgtggtggaggaagaggggtcg
gctgcgcgaccgcgacccctccggctgtccgaactccgcttgcccgagaggcagcagagc
gtgccgcgcagctcctccttcttcatcttcggcagcgcgaaccccgtccgcgtgttctgt
tttcgggtcgtgaaccgcctgaccttcgccaacttcatcctggccgtcatcatcctgagc
agcctcgcgctgggtgccgaggatcccatccagccacactcgctgcgcaaccagatcctg
ggatacgccgattacctcttcaccggcatcttcacgctggagatcctcatgaagctcaca
gcgtacggagcgtttctgcacaagggttccttctgccggagctgcttcaacttgctggac
ctgctggtggtgggggtctccctcctgtccttcggcatgcagtcgagcgccatctccgtg
gtgaagatcctacgcgtgctgcgcgtgctgcgtccactccgcgccatcaaccgcgccaag
ggcctcaagcacgtggtgcagtgcgtgttcgtggcgttgcgaaccatcgggaacatcctc
ctggtcaccacgctgctccagttcatcttcgcatgcgtcggcgtgcagctcttcaagggg
aagctgttcagctgcaccgatcagtcaaagcacaacccaagcgagtgcaggggatacttc
gtcgtcgtgcgggagcacgggcctcccgtggccgtgaggcgcgagtggcagaacagcgag
tacaacttcgacgacgtcctctccggcatgctcaccctcttcaccgtgtccaccttcgag
ggctggcccgggctactgtacaaggccatcgactctcgtgccgaggacttgggcccggca
cacaaccaccgcctggccgtgtccatcttcttcatcgtctacatcatcatcatcgccttc
ttcatgatgaacatcttcgtgggcttcgtcatcatcacgttccaggcgcagggcgagcag
gaattcgagaactgcgagctggacaagaaccagcgcaagtgcgtggagtacgcgctgaag
gcccgcccgctcaagaggcagatgcccgcgggagccaggcagcggtgggtgtggagcatc
gtcacctccacgcccttcgagtacctcatgttcgtcctcatcctcctcaacacgctgtgc
ctcgcctcgcagcaccacggacagagcaagggattcagccgcttcatggacatttgcaac
gtgatcttcaccgtgctgttcgcgctcgagatgctgctcaagctcatcgccttccagctg
aagggctacttcagcgacccgtggaacacgttcgacttcctcatcgtcgtgggcagcgtc
atcgacgtcgtcgtcaacgagcaggagctgttgttgctttgctgcaagttcccctccacc
accgctggtgcgcttctgcgcgacccccacgccggggtggaagaggagcgccaccgcttc
tccatcacgttcttccgcctcttccgggtgctgcggctcgtcaagctgctgagccgcggg
gagggaatccgcacgctgctctggacgttcctcaagtcgttccaggcgcttccttacgtc
tcactcctcatcgcgatgctcttcttcatctacgccgtcatcggcatgcagctgttcggc
aggatcgcgctgcaagacggaacgcacatcaacaggaacaaccacttccagacgttcctg
cagtccatcctcctcctcttcaggtgtgccacgggcgaggcgtggcaggagatcatgctc
gcctgcatgcccggccagcgctgccacccggggctcggtctcccgcgccacgaagccttc
tcctgcggctcctccttctccgtcctctacttcgtcagcttcttcatgctctgcgctttc
ctgatcatcaacctgttcgtggcggtgatcatggacaactttgactatctgacgagggac
tggtccatcctggggcctcaccacctggacgagttcaagcggtgctgggccgagtacgac
cccgaggccacgggccgcatcaagcacgtggacctggtgatgctgctgcgtcacatccaa
cccccgctgggattcgggaaactctgtccccaacgtgtcgcctgtaagaggctcgtgatg
atgaacatgcccctgggcggcgacggcaccgtcaggttcaacgcgacgctgttcgcgctc
gttcggacctcgctaaaaatcaagacggagggcaacgtggaccaggccaacgaggagatg
agggccatcgtgaagaagctctggaagagaaccaacgtggcgctgctggaccaggtcgtg
ccgccggccggagatgacgaggtgacggtgggcatgttctacgcctccttcctcatccag
gactacttccgaaagttcaggcagcgcaaggagcaggggaccttcagcaacgccgtcatg
ctgcgcgccgggctgaggagccgtcaggagttgacccccacggtgaagcgagccatttca
gggacgatcccgggagaagatgaccaagacagcgcggacgaggagatggaggaggtgggg
gatgaggaggaaggccaggctctaatgagggtcacggccggcggggatccggaggcgcgc
cggtctggcgattccgtgcctccagcccagcggaggccgctgctgctgccgccgccaccg
ctggcgcggggccgggtgcgctcgcggcctcgcgacggagtccttccacgcggcccccgc
aggtcccgggcccggcgacccagggccgccgccgacgccgccgacgccgcggtcgtgggg
ggcggcggtgcccccggcgaatccaccgcgcgcgccggcggcggcggagagagccgcggg
gcggcagggacgcgagcggtgccgccgagcgacggagatgaagcggagatgacgtaccac
ccctcctggtcgctccgggtcgcagcggcgccgggcgacccgtgtcctggtcacgtgtaa
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