Lethenteron reissneri (Far Eastern brook lamprey): 133357132
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Entry
133357132 CDS
T09663
Name
(RefSeq) LOW QUALITY PROTEIN: tumor necrosis factor alpha-induced protein 3-like
KO
K11859
tumor necrosis factor, alpha-induced protein 3 [EC:
3.4.19.12
]
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Pathway
lrj04217
Necroptosis
lrj04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
133357132
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
133357132
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lrj01002
]
133357132
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lrj04121
]
133357132
Enzymes [BR:
lrj01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
133357132
Peptidases and inhibitors [BR:
lrj01002
]
Cysteine peptidases
Family C64
133357132
Ubiquitin system [BR:
lrj04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
133357132
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OTU
zf-A20
BofA
Motif
Other DBs
NCBI-GeneID:
133357132
NCBI-ProteinID:
XP_061430919
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Position
56:8679399..8689675
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AA seq
849 aa
AA seq
DB search
MGVLDSGPRRCILRPAAAADDLVAAAMTTTVSEVAADVKNSLPKSFSSCNLVRATRLRDA
VADDLRGGREPCFGGMHTRSVALFGMGTYSDGLRRQLERHLLEMEMQVELERRRLLNWCP
QTRRLYALKTPGDGNCLVHAASLAMWAVSDSECTLRSAMHSSLCDPGLAANFRRRWMRSR
ASADGAEELGFRYSTRDWEEEWSKVVEMSRPTEHSSRDGFRFQSLEEIHIFILANVLRRP
IVIISDVVLRSLASGSTLAPLNISGIYLPLNWLASACYRYPLVLGFHNGHFAPLVCMQDG
PAAEQRKQHAFPLVDRHRATLPLQFLLPEEEQNKTLLLQEYMDTQEVAMPGQRASPPILM
ARLPPVNTGDDLDLVSDYREVVERKFRAGTVRAPTSALRAPVARRADDAAANTMYSATNE
ACSTPGCGYMRSVHTGAFCHECISKLRAGSAGVVGGTGGIGDVAGRRALATTPHLEAPEE
TEAREAERLGXAAAAPPSPTGVLPSAPELPALLVEPSGMKCSSPTCPFTGDQLLAGLCQN
CFHLRQGRRSASENVGGSGAGAAEPPTAANAGGHAPERRREEDAHERCSGCGEGAALGSI
ALCQACVDKPSLAPTIRREEGGRGAAEPARGSAGGAAAAAVAATLEAPRSEKCKTPGCXF
FGTATKEFYCTICFLQYLENRAADEMQPGGQYAEPPRGPPAAGPARQEGGRVQCVTLACR
QLGKARLDGCCTDCYLNRASEREEWEPALELRAAPAAAPKCRTESCADDATAGGALCAAC
RRRNEQLRHTHPQRLQRRQTSGAADRPAEREPVVARRNKCRAPGCEHYGNGGCNGYCNEC
HAMIQLYGR
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atgggagttctcgattctggtccccgtcgttgtatcttgcgtccagcagcagcagcagac
gacctggtggcagcagcgatgacgacgacggtgtcagaggtcgcggccgacgtgaagaat
tcgctgcccaagagtttcagtagctgcaacctggtgagggccaccaggctcagagacgcc
gtggccgatgacctccgcggaggtcgcgagccgtgctttggtggcatgcacacccgctcg
gtggccctgttcggcatgggaacgtacagcgacggcttgaggaggcaactggagaggcat
ctgctggagatggagatgcaggtggagctggagaggaggaggcttctcaactggtgcccg
cagacgaggcgtctgtacgccctgaaaactcccggcgacgggaactgcttggtgcatgcg
gcatcgctggccatgtgggccgtgtcggactcggagtgcacgctgcgatccgccatgcac
tcctcgctgtgcgacccggggctcgccgcaaacttccgccggcgctggatgaggagccgc
gcctctgccgacggagcggaggagctcggattccgatattccacacgggactgggaggag
gagtggagcaaggtggtggagatgtctaggcctacggaacactcgtcgcgtgacggcttc
cgcttccagtcactggaggagatccacatcttcatcctggccaatgtgctgcgtcgaccc
atcgtcattatctcagatgtcgtgctgaggagtctcgccagcgggtccaccctggcaccg
ctcaacatatccgggatctacctgcccctcaactggctcgcgagcgcatgctaccgctac
ccgctcgtgctgggcttccacaacggacacttcgcccccctcgtctgcatgcaggacggc
ccagccgctgagcagcgcaagcagcacgcgttcccactggtggacaggcaccgcgccacc
ctccccctgcagtttctcctgcccgaggaggagcagaacaagacgttgctgctgcaggag
tacatggacactcaggaggtggcgatgccaggccagagagcctctccccccatcctgatg
gcaaggttgccacctgtgaataccggcgacgacctggacctggtgagcgactaccgggag
gtggtggaacgcaaattccgcgccggcacggtccgggcgccaacctctgccctccgagct
ccggtggcccggcgcgcggacgacgccgccgccaacacgatgtactcggccaccaacgag
gcgtgcagcacgccgggctgcggctacatgcgctccgtccacacgggcgccttctgccac
gagtgcatcagcaagctccgcgccggcagcgccggtgttgtcggcggcaccggcggcatt
ggcgacgtggcgggaaggagggcgctcgcgacgactccacatttggaagccccagaagag
acggaagctcgggaggcggaacgcctggggnntgccgcggcggcaccgccgtcgccgacc
ggcgtcttgccgtcggcgccagaacttccggcgctcctcgtggaaccgagcggtatgaag
tgctcctcgcccacgtgccccttcacaggcgatcagctcctcgcgggcttgtgccagaac
tgtttccacctccggcagggacgccgctcggccagcgaaaacgtcggcggtagcggcgcc
ggcgccgccgagcctccgaccgccgccaacgccggcggccacgccccggagcgccggcgc
gaggaagacgcgcacgaacgctgcagcggctgcggggagggggcggcgctgggcagcatc
gcgctgtgccaggcgtgcgtcgacaagccgtcgctggcgccgacgatccgccgcgaggag
ggaggccgcggggccgccgagccggcgcgcggatcggcggggggggcggcggcggccgcg
gtcgccgcgacgttggaagcgcccagaagcgagaagtgcaagactcccggctgcngattt
tttgggacggcgacgaaggagttttactgcaccatctgcttcctgcagtacttggagaac
agagcggcggacgagatgcagccaggcggccagtacgccgagcctcccagagggcccccg
gccgcagggcctgcgaggcaagaggggggccgggttcagtgcgtcacgctcgcctgccgg
caactcggcaaagccaggctggacggctgctgcaccgattgctacctgaacagggcttcc
gaacgcgaagagtgggagccagccctggagctcagagcggctccggcagccgcccccaag
tgccgcacagaatcctgcgcggacgacgcgaccgcgggcggcgccctgtgcgccgcctgc
cggcgcaggaacgaacagctgcggcacactcacccgcagcggctgcagcggaggcagacg
tccggggcggcggatcgtcccgctgagcgcgagccggtggtcgcgcgccggaacaagtgc
cgggctcccggctgcgagcactacggcaacggcggctgcaacggctactgcaacgagtgc
cacgcgatgatccagctgtacggccggtga
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