KEGG   Lethenteron reissneri (Far Eastern brook lamprey): 133360954
Entry
133360954         CDS       T09663                                 
Name
(RefSeq) E3 ubiquitin-protein ligase RBX1-like
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
lrj  Lethenteron reissneri (Far Eastern brook lamprey)
Pathway
lrj03420  Nucleotide excision repair
lrj04110  Cell cycle
lrj04114  Oocyte meiosis
lrj04120  Ubiquitin mediated proteolysis
lrj04141  Protein processing in endoplasmic reticulum
lrj04310  Wnt signaling pathway
lrj04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:lrj00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    133360954
   04120 Ubiquitin mediated proteolysis
    133360954
  09124 Replication and repair
   03420 Nucleotide excision repair
    133360954
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    133360954
   04350 TGF-beta signaling pathway
    133360954
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:lrj04121]
    133360954
   03400 DNA repair and recombination proteins [BR:lrj03400]
    133360954
Enzymes [BR:lrj01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     133360954
Ubiquitin system [BR:lrj04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   133360954
  Multi subunit type E3
   SCF complex
    Ring finger protein
     133360954
   Cul2 complex
     133360954
   Cul3 complex
     133360954
   Cul4 complex
     133360954
   Cul7 complex
     133360954
   Cul8 complex
     133360954
   Cul9 complex
     133360954
DNA repair and recombination proteins [BR:lrj03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      133360954
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      133360954
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4_2 zf-C3HC4 PHD_NSD zf-RING_11 zf-RING_UBOX zf-RING_16 SCIFF zf-RING_5 Peptidase_M35 zf-Nse PHD
Other DBs
NCBI-GeneID: 133360954
NCBI-ProteinID: XP_061435827
LinkDB
Position
70:1855321..1855843
AA seq 102 aa
MAAALEVDTPCASTTTGGGGKKRFEVKKWNAVALWAWDIVVDNCAIYRNHIMDLCIECQA
NQASATSVECTVAWGVCNHVFHFHCISRWLKTRQVCPLDNRE
NT seq 309 nt   +upstreamnt  +downstreamnt
atggcagccgcattggaggtggacacgccatgcgcctcgaccaccactggcggcggtggc
aagaagcgcttcgaggtcaagaagtggaatgccgtggccctgtgggcgtgggatattgtc
gtggataactgtgccatctaccgcaaccacatcatggatctctgcattgagtgtcaggcg
aaccaagcatcagccacctcggtggaatgtacagtggcttggggcgtctgcaatcatgtt
tttcacttccactgcatctcacgctggcttaaaacccggcaagtctgtcccctcgataat
cgtgagtga

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