Lethenteron reissneri (Far Eastern brook lamprey): 133361160
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Entry
133361160 CDS
T09663
Name
(RefSeq) TNF receptor-associated factor 2-like isoform X1
KO
K03173
TNF receptor-associated factor 2 [EC:
2.3.2.27
]
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Pathway
lrj04010
MAPK signaling pathway
lrj04137
Mitophagy - animal
lrj04141
Protein processing in endoplasmic reticulum
lrj04210
Apoptosis
lrj04217
Necroptosis
lrj04621
NOD-like receptor signaling pathway
lrj04622
RIG-I-like receptor signaling pathway
lrj04920
Adipocytokine signaling pathway
lrj05132
Salmonella infection
lrj05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
133361160
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
133361160
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
133361160
09143 Cell growth and death
04210 Apoptosis
133361160
04217 Necroptosis
133361160
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
133361160
04622 RIG-I-like receptor signaling pathway
133361160
09152 Endocrine system
04920 Adipocytokine signaling pathway
133361160
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
133361160
09171 Infectious disease: bacterial
05132 Salmonella infection
133361160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lrj03019
]
133361160
04121 Ubiquitin system [BR:
lrj04121
]
133361160
Enzymes [BR:
lrj01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133361160
Messenger RNA biogenesis [BR:
lrj03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
133361160
Ubiquitin system [BR:
lrj04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
133361160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
zf-TRAF
zf-C3HC4_3
TRAF2_zf
zf-C3HC4_4
TRAF_BIRC3_bd
zf-C3HC4
zf-C3HC4_2
TRAFD1-XIAF1_ZnF
Sina_ZnF
TMCO5
Motif
Other DBs
NCBI-GeneID:
133361160
NCBI-ProteinID:
XP_061436017
LinkDB
All DBs
Position
71:634789..660950
Genome browser
AA seq
645 aa
AA seq
DB search
MRVKDMGSTVRRSPCTQTPTTVSPLPGPSHAATALEKGGAGPGGGGIARIMGEALAVLSA
PVRDGYPLEVLRHEPDFKYLCGACGRLLRAAVQAPCGHRFCHGCHSKLATRPEQWLCPRC
QEEGTHEEELYSSPNNQCFPDRATRREVDQLPARCTNPGCSWSGIVRDYDGHESSCELRW
AACPACGGRVRLRELAEHAQKSCPARTAPCRHCRAPCTAQELPEHDLTCPKFPTTCTACG
KRKIPREKLPLHEKSCLRVKRPCRFADIGCPFQAEAEKLAGHEQLATASHVAILRSFLLR
LHGLLPTQAACAATAEAAGDGGGGGGSGGGAAAAAAGASVPQLDPASDGRLSELALRLSR
LEVAVAARGGGGAARRVGRPSAAAGAEGGAAAPGDGKEAAALAAVVPAALEQRCARLERS
LGPLEATVAALDRQAERCSAAAREAHTRRQAERGAVATLTGKMQALERKLALREVALADM
TLRLSTLELSSHDGSFVWRVGDVGRRRSDAASGRQLAVYSPAFFTSRYGYKMCLRLYPSG
DGAGKDSHLSLFFVLMRGDHDATLRWPFRQKVTLMLLDQSSRRDHVVDAFRPDATTSSFQ
RPTGDLNVASGCPLFCPLARLVSSEQTYVRDDTLFIKCVVDTTDL
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgtgaaggatatgggatcgactgtgaggcgttcgccatgcacgcagacacccacc
acggtctccccgctcccagggccttcgcacgctgccaccgctctggagaaaggaggagca
gggccaggaggaggaggcattgcgaggatcatgggggaggcgttggccgtgctgtcggcc
cccgtgcgggacgggtacccgctcgaggtgctgcggcacgagcccgacttcaagtacctg
tgcggcgcctgcggccgcctgctcagggcggccgtgcaggcgccctgcggccaccgtttc
tgccacgggtgccacagcaagctggccacgaggccagagcaatggttgtgccctcgttgt
caggaagaaggaactcacgaagaggaattgtactcgtcgcccaacaaccagtgtttccct
gaccgggcgactcgccgtgaggtggaccaactccccgctcgctgcaccaacccgggctgc
tcgtggtccggcatcgtgagagactacgatggtcacgagtcgtcttgtgagctccgctgg
gccgcgtgccctgcgtgtggtggccgcgtgcgactccgcgagttggcggagcacgcccag
aagagctgccccgcacgcacagcgccttgcaggcactgccgggcaccctgcaccgcacag
gagctgccggagcacgacctcacctgcccaaagttccccacgacctgcactgcgtgcggg
aagcgcaagatacccagagagaagctgcctctgcatgagaagtcgtgcctccgcgtcaag
cggccctgccgcttcgcagacatcgggtgccccttccaggccgaggctgagaagctcgcg
ggacacgagcagctggcgaccgcctcccacgtcgccatcctgcgctccttcctgctgcgc
ttgcacggcctgctgccgactcaggccgcttgcgccgccaccgccgaagcagccggtgac
ggcggcggtggcggcggcagtggtggtggtgcggctgcagctgcggcgggggcatcggtc
ccgcagttggatccggcttcggacggccgcctgtccgagctggcgctgaggttgtcccgg
ctggaggtggcggtggcggcgaggggcggggggggggccgccagacgtgtcgggaggccg
tcggcggccgccggggctgaaggaggagccgcggcgccaggcgacgggaaggaggcggcg
gcgttggcggcggtggttccggcggcgctggagcagcgctgcgccaggctggagcgctcg
ctgggcccgctggaggccaccgtggccgcgttggaccgccaggccgagcgctgctccgcc
gccgcacgggaggcccacacgcggcgccaggccgagcgtggagccgtcgccacgctcacc
ggcaagatgcaagcgctggagcgcaagctggcgctgcgggaggtggcgctggccgacatg
acgctgcgcctctcgaccctggagctctcgtcccacgacggctccttcgtgtggcgggtc
ggcgacgtgggccggcgccgcagcgacgccgccagcgggcgccagctcgccgtctactcg
ccagcgttcttcacgagccgctacggctacaagatgtgcctgcgcctgtaccccagcggc
gacggcgctggcaaggactcgcacctgtcgctcttcttcgtgctcatgcggggcgaccac
gacgccacgctgcgctggcccttccgccagaaggtgaccctgatgctgctggaccagagc
tcgcgccgtgaccacgtggtcgacgccttccgcccggacgccaccacctcctccttccag
cgccccaccggggacctcaacgtggccagcggctgccccctcttctgccccctcgcccgc
ctagtttcgtcggaacagacctacgtgcgggacgacaccttgttcatcaagtgcgtggtg
gacacgaccgacctgtga
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