Lethenteron reissneri (Far Eastern brook lamprey): 133361243
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Entry
133361243 CDS
T09663
Name
(RefSeq) TNF receptor-associated factor 2-like isoform X1
KO
K03173
TNF receptor-associated factor 2 [EC:
2.3.2.27
]
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Pathway
lrj04010
MAPK signaling pathway
lrj04137
Mitophagy - animal
lrj04141
Protein processing in endoplasmic reticulum
lrj04210
Apoptosis
lrj04217
Necroptosis
lrj04621
NOD-like receptor signaling pathway
lrj04622
RIG-I-like receptor signaling pathway
lrj04920
Adipocytokine signaling pathway
lrj05132
Salmonella infection
lrj05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
133361243
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
133361243
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
133361243
09143 Cell growth and death
04210 Apoptosis
133361243
04217 Necroptosis
133361243
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
133361243
04622 RIG-I-like receptor signaling pathway
133361243
09152 Endocrine system
04920 Adipocytokine signaling pathway
133361243
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
133361243
09171 Infectious disease: bacterial
05132 Salmonella infection
133361243
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lrj03019
]
133361243
04121 Ubiquitin system [BR:
lrj04121
]
133361243
Enzymes [BR:
lrj01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133361243
Messenger RNA biogenesis [BR:
lrj03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
133361243
Ubiquitin system [BR:
lrj04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
133361243
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
TRAF_BIRC3_bd
TRAF2_zf
TRAF3_RING
zf-TRAF
zf-C3HC4
zf-C3HC4_4
zf-C3HC4_2
Sina_ZnF
zf-RING_5
zf-RING_UBOX
zf-C3HC4_3
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
133361243
NCBI-ProteinID:
XP_061436128
LinkDB
All DBs
Position
71:271719..292941
Genome browser
AA seq
561 aa
AA seq
DB search
MLMSKTLLLTPSSAGPSEPCMAHAVPASAHGPESIAGRDAAGQDGEGDETAEAAAGLNPA
ILGSSAPDPKHLCCHCRLLLRTPVQTQCGHRYCQACLAQLVRQRHMTCAKCTDENVFDPH
LSILDNTKAFHDRAAQREIDCLSARCVNEGCPWTGTVKEYWSVHEEHCEFSTLPCPFQDV
GCTVKVSRGELSRHEEAAVPLHLRLLLAPLVSLRSALLVPPASERSVLENGAAGAGAGAV
PRRVGAVESRVRKLEELLERLDVNGGDGGGSGSWNKADSGINSASLASVSPRRGQAGAAR
GGRKKGAAAAPPAEGGAEEEGGAAVVLGRLARVERMLTAFENIVKVLDRETERVAVAQRE
TERQRREEQQQLHAAQAKMREVERQLAAKEAALAELRGRLLSLEAATFDGVFLWKISSFR
QRSRDASEGRNLAFYSPAFYTSQHGYKMCLRLYPNGDGAGRGSHLSLFFVIMKGDHDALL
PWPFKYKVTMMLLDQDRREHVIDAFRPDVTSSSFQRPTGDLNVASGCPLFCPLARLQGQQ
RQAYVRDDTIFIRCIVETDGV
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgttgatgagtaaaacacttttactgacaccctcatctgcaggcccctctgagccgtgc
atggcccacgcggtgccagcgagcgcacatgggccggagtcgatcgccgggagggacgcc
gccggccaggacggcgagggggacgagacggcggaggctgcggctggattgaacccggcc
atccttggctcctcagcgcccgaccccaagcacttgtgctgccactgccgcctgctgctg
cgcacgccggtgcagacgcagtgcggccaccgctactgccaggcctgcctggctcagctg
gtccggcagaggcacatgacctgcgccaaatgcacagatgaaaacgtgttcgacccccac
ctgtccattctcgacaacacgaaggcctttcacgacagggcggctcaacgggagatcgac
tgcctttccgctcgctgcgttaacgaaggctgcccctggaccggaaccgtcaaggagtac
tggtcagtgcacgaggagcactgcgagttctccaccctgccctgccccttccaggacgtc
ggctgcacggtcaaggtctcgcgtggtgagctctcccggcacgaggaggcggcggtgccg
cttcacctgcggctgctgctggcgccgctcgtgtccctgcgctcggcgctcctcgtcccc
cccgcgtcggagcgctccgtcctcgagaacggggccgccggtgccggcgccggcgccgtc
ccccggcgagttggcgccgtcgagtcgcgcgtgcgcaagctggaggagctcctggaacgg
ctcgacgtcaacggcggcgacggcggcggcagcggcagctggaacaaggcggactccggg
ataaacagcgccagcttggcgtcagtatcgccacgacgggggcaagccggcgccgcgagg
ggcggtcgcaagaagggagcggcggcggcgccgccggccgagggaggggcggaggaggag
ggtggtgcggcggtggtgctggggcggctggcgcgcgtggagcgcatgctcacggcgttc
gagaacatcgtcaaggtgctggaccgcgagacggagagggtggcggtggcgcagcgggag
acggagcgccagcggcgggaggagcagcagcagctgcacgcggcacaggccaagatgcgg
gaggtggagcgccagctggcggcgaaggaggcggcgctggccgagctgcggggccgcctg
ctctcgctcgaggcggccaccttcgacggagtcttcctgtggaagatctccagcttccgc
cagcgcagtcgcgacgccagcgaagggcgcaaccttgccttctactcgccagcgttctac
acaagccagcatggatacaagatgtgcctccggctctacccaaatggggacggcgccggc
cgtggcagccacctctcgctgttcttcgtcatcatgaagggggatcacgacgccctcttg
ccgtggccgttcaagtacaaggtgacgatgatgctgctggaccaagaccggcgggagcac
gtgatcgacgccttccgcccggacgtgacgtcctcctccttccagcgccccacgggcgac
ctgaacgtggccagcggctgccccctcttctgccccctggcccggctgcagggccagcag
cggcaggcctacgtgcgcgacgacaccatcttcatccgctgcatcgtcgagaccgacggg
gtctga
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integrated database retrieval system
