Lethenteron reissneri (Far Eastern brook lamprey): 133361722
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Entry
133361722 CDS
T09663
Name
(RefSeq) LOW QUALITY PROTEIN: latent-transforming growth factor beta-binding protein 1-like
KO
K19559
latent transforming growth factor beta binding protein 1
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Pathway
lrj04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
133361722
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lrj04990
]
133361722
Domain-containing proteins not elsewhere classified [BR:
lrj04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
133361722
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
TB
EGF_3
EGF
hEGF
FXa_inhibition
EGF_2
EGF_MSP1_1
TFIIA
DUF3464
Motif
Other DBs
NCBI-GeneID:
133361722
NCBI-ProteinID:
XP_061436712
LinkDB
All DBs
Position
8:complement(5907546..5958178)
Genome browser
AA seq
1896 aa
AA seq
DB search
MGATGATLGTLLVAIAVLLEPVEPLEPAQAAAAAGREGHAYARQPLGRGTIRKRLVPGPP
GSARLVSLARDEVVVLGAGDTRHSGVNACEGGRCCPGWTTGPDSQRCSVPLCHPPCLNGG
ICIRPQVCVCQPGSRGRSCQELTSPPPAAPAIPLPPAAALPLPLAVPFAQAGMPSLPPAA
LVAPPRGPKRSAERAVGPPDSHEAPGSAPGVSLLREGTAMVVMGTPGLPSPHAPPPQDLP
SLRDLPSSPEEVQELLRTAPERVAQMLAGSLGEAARRLGGPPGGAGAPGSPGTPDWAMLS
AVEEAAQKILSPLGGTAHMTVRIQRQPALVMSNQVRTVPHGVLPPPQSRGTEMRLSAAGG
SPHMISTGSQHFIIGGEGRAEAAVAAAAAAGGGGAANGTGGRIRVVLAPTVCRAVCSART
GCRNACERGNATTLVSETGRGVDTLTGAGFTVVVCPIPCRNGGTCSAGGRCKCSSEFTGK
FCQMPVSPGAPSERDHQRTSSQGALRVVLHPSEAVSVDARESRPRYHILPVVQQYHHQQQ
QQQHHQQQQYHHQQHQQQQHHQQQQQYHHHQQRSQSVPMVPGARLIGRVSMNRVSGLHGV
QRHGAQQQGSLGRCFQDVGAKCTEPLPGLSRQEDCCATLGTAWGISMCSKCPPIPETPRS
GPAPAPGQAPAPSPARTRAQLSCPRGFKLDTQGKCRDVNECQAAGLCPHAHCSNTQGSYR
CECEPGYLADSSRTRCLQVAEQRGSCYRAVTAGRCVGLLALPIPRHICCCTIGQAWGPSC
ERCPPPGTAAFKQICPAGTGYYFPVTGVRMRPETPARPPMAPVAPVAPVAPAAVPRVPVR
EPPPSVRLSPIVTPPPRQGGDGSRAEEMDGHSPVLAVRPLPPTPVVAVEPEVVTVAAQVI
GVTQVTDVDVCAVSPGVCGEGRCVPQPGGHTCQCHAGHQLNARTGTCTDVDECAMEPRPC
QGGRCVNSPGSFVCHCRPGFTLDVTNCRDVDECESSPCGPGSRCVNSEGSFACRCLPGFA
APPGGGGARSMTCEDVDECLRPGLCRGGRCVNLPGSHRCEFCDPGFQMNTEWECEDVDEC
QDVSVCPDARCLNTNGAYECAACGPGYRAQLGSCTDEDECAVGRVCGDTGFCTNTDGAFS
CTACRAGFEPDVSGTACQDVDECVGEDVCDGGTCVNVPGSFSCRCLPGFQPSARGDACHD
VDECEMAPCGPFGTCANSAGSFSCSCGDSFILGPDGSCHDVDECEDAEPCEGGRCVNTEG
SFSCECQAGFRAGVPAQHLYLDECVEYGEAACGSWQCENTPGSYRCMQDCPPGFTRDGAS
SCEDIDECRGNSSACGSHGACENSAGSFRCLCHRGYQATPDGRTCVDANECETLSRVCGE
ALCENVEGSFLCVCPHEEHEFQPMTGMCAPRARAEVSAAHGEWAGAHGQRPPPPPPPAAP
AAAAASMPSGGAQGDGDRAACFYSPGQEGGAGGPEDGEEGEDAGEEEGCGAPLGANVTRQ
VCCCTVGTSWGSCDGQRCPHFGSAEFREMCPKGRGYIPTGDSVYSAGRGRYRDADECELF
GAEICQQSFCINTEPGYQCFCRAGFDYDPMKMQCFDVDECMDGSSCVGGECVNTPGSYNC
FCRPPQVLDATGRRCGNSSTPDDVPEEMDIHMDLCWKRVSSDFMCSSPIVGKQTTYTECC
CLYGEAWGHECALCPMRTSADYAQLCNLPRAGDGGPGRTLHEGSHYGEDMHGPPYLEPGF
AYPGGPEPHPGMLPLYITDGDGYYGEGSEGLQGEECGILSGCENGRCVRVREGFTCECDP
GFQLDNSRMQCLDVDECEESNPGGPLCSNGHCTNTEGSFRCSCPQGTALGPDGRVCEPHR
APRAPRAPKPSRAPKPSKAPKPSRAQLRSHRARRAP
NT seq
5691 nt
NT seq
+upstream
nt +downstream
nt
atgggtgctaccggcgcgacgctggggactctgctggtggcaatcgcggttctgctggag
cccgtggagcccctggagcccgcgcaggcggcagcagcagcaggacgagagggccacgcg
tacgcgaggcagccgctgggccgtggcacgattcgcaagaggttggtgccgggtccgccc
ggctccgcgcgcctcgtgtctctggcgcgggacgaggtggtggtgctgggagccggggac
acgcggcacagcggggtgaacgcgtgcgagggggggcggtgctgcccgggatggacgacg
ggacccgactcccagcgctgctccgtgcctctgtgccaccccccgtgcctcaacgggggc
atctgcatacgaccgcaggtgtgcgtgtgccagcccgggtcccgtggccgcagctgccag
gagctcacctctccaccccccgcagcgccggccataccccttcctccggcagcggccctg
ccattgcccctggccgtgcccttcgcccaggctgggatgccctcgctacccccggctgcc
ctcgtcgcgccgccgcggggtcccaaacgatcggcggagcgcgccgtgggtccccccgac
tcccacgaggcgccggggtccgcgccgggcgtgtcgctgctgcgggaggggacggcgatg
gtggtgatgggcacgccggggctgccctcgccgcatgccccgccgccccaggacctgccc
tccctgcgggacctgccctcgtcacccgaggaggtgcaagagctgctgcgcacggcgccg
gaacgcgtggcgcagatgctggcggggtccctgggcgaggcggcgcgacgcctggggggg
cctccaggaggagctggggccccgggcagtccggggacgcctgattgggccatgctgagc
gccgtggaggaggcggcgcagaagatcctgagccccttggggggcacggcgcacatgacc
gtgcgcatacagaggcagccggcgctggtgatgtccaaccaggtgcggacggtaccccac
ggggttctgccccctccccaatctcggggcaccgagatgcgcctctccgcggcggggggg
tccccccacatgatcagcacggggagccagcacttcatcatcggtggcgagggcagggct
gaagcagcggtcgcagcagcagccgcggcgggaggcgggggagcggcgaacggcacgggg
gggcgcatcagggtggtgctcgcccccacggtgtgtcgcgccgtgtgctcggcccgcact
gggtgccggaacgcgtgcgagcgcgggaacgcgaccaccctggtgagcgagaccggacgc
ggcgtggacaccctcaccggggcggggttcacagtggtggtttgccccattccctgccgc
aatggaggcacgtgctccgcggggggccgctgtaagtgttcctcggagttcacggggaag
ttctgccagatgccggtgtctcctggagccccatctgagagggaccatcagaggacttcc
agccagggagccctgagagtggtgctccacccgagcgaagcggtgagtgtggacgctcgc
gagtcgcggcctcgctaccacatcctgcccgtggtgcaacagtatcaccatcagcagcag
cagcagcagcatcatcaacagcagcagtatcaccatcagcagcaccagcagcagcagcat
catcaacagcagcagcagtatcaccatcatcagcagcggtcccagtccgtgcccatggtg
ccgggagcgaggctgatcggacgcgtgagcatgaaccgggtgagcggactccacggggtc
cagcgtcacggggcccagcagcaagggtccctcggtcgatgcttccaggacgtgggggcc
aagtgcacggagcccctgcccgggctgagccggcaggaggattgctgcgcgaccctgggc
accgcgtgggggatcagcatgtgctccaagtgccccccaataccagagaccccccgcagc
ggccccgcccccgcgcccggacaggcccctgcgccaagccccgcccgcacccgagcgcag
ctgagctgtcccaggggattcaagctggacacgcaggggaagtgccgagacgtgaacgag
tgccaggcggcgggcctgtgcccacacgcgcactgctccaacacgcagggcagctaccgg
tgcgagtgcgagcccgggtacctggccgactcctcgcgcaccagatgcctgcaagtggca
gaacagagaggcagctgctaccgcgcagtgacggcgggccgctgcgtggggctgctcgcg
ctgcccatcccgcgccacatctgctgctgcaccatcggccaggcgtgggggccctcgtgc
gaacgctgccccccacccggcacagccgccttcaagcagatctgcccggccggaacgggg
tattacttccccgtgacgggggtgcggatgcggccggagacccctgcccggccccccatg
gcccccgtggcccccgtggcccccgtggcccctgccgctgttccccgcgtccccgtcagg
gagccgcccccctctgtgcgcctctcgcccatcgtcactccgccaccacgacagggcggt
gacggcagcagggccgaggagatggacggccacagcccagtgctcgcggtgcgcccgcta
ccgcctacgccggtggtggccgtggagccggaggtcgtgacggtggcggcacaggtcatc
ggggtcacgcaggtcacagacgtggacgtgtgtgcggtgagccccggggtgtgcggggag
gggcgctgcgtgcctcagcctggaggccacacctgccagtgccacgcaggccaccagctc
aatgcgcgcacgggcacctgcacagatgtggacgagtgcgcgatggagccgaggccgtgt
cagggcggtcgctgcgtcaattctccgggcagcttcgtgtgtcactgccgccccgggttc
actctggacgtgaccaattgtcgtgacgtggacgagtgcgagtcgtccccgtgcgggccg
ggcagtcgctgcgtgaactcggagggctccttcgcgtgccgctgcctccccggcttcgcg
gcccccccgggcggcggcggcgcccgcagcatgacgtgcgaagacgtggacgagtgccta
aggcccggactctgccgcggcggccgctgcgtgaacctccccggctcccaccgctgcgag
ttctgcgacccgggattccagatgaacacggagtgggagtgcgaagacgtggacgagtgt
caggacgtgagtgtgtgcccggacgctcgctgcctcaacacgaacggggcctacgagtgt
gcggcgtgcggcccgggataccgcgctcagctcgggtcctgcaccgacgaggacgagtgt
gcggttggccgcgtgtgcggtgacacgggattctgcaccaacacggacggcgccttctcc
tgcaccgcgtgccgcgccggcttcgagcccgacgtcagtggcaccgcctgtcaggatgtg
gacgagtgtgtgggcgaggacgtgtgtgacggcggcacctgcgtcaacgtccccggctcc
ttctcgtgccgctgcctccccggcttccagccctcggcgcgtggcgacgcgtgtcacgac
gtggacgagtgcgagatggcgccgtgcggaccgttcgggacgtgtgccaacagcgccggc
tcattcagctgcagctgcggtgacagcttcatcctggggcccgatggcagctgccatgac
gtggacgagtgtgaggacgcggagccgtgtgagggtggacgctgcgtcaacacggagggc
tccttctcctgcgagtgccaggccggcttccgtgccggcgtcccggcccaacacctgtac
ctggacgagtgtgtggagtacggggaggcggcatgcgggtcctggcagtgcgagaacacg
cccggctcctaccgctgcatgcaggactgtccgcccggattcacgcgggatggcgccagc
agctgtgaggacattgacgaatgccgcgggaactcgtctgcatgcgggagccacggagcg
tgcgagaacagcgccggatccttccgctgcctgtgccaccgcgggtaccaggcgaccccg
gatgggcgtacctgcgtcgacgctaatgagtgcgagacgctgtcgcgcgtgtgcggagag
gcgctgtgcgagaatgtggagggctccttcctctgcgtgtgcccccacgaggagcacgag
ttccagcccatgactgggatgtgcgcaccgcgcgcccgcgcagaagtgtccgcggcgcac
ggggagtgggcgggagctcacggccagaggccgccgccgccgccgccaccagcggcacca
gcggcagctgcagcatcgatgccatcgggcggcgctcagggcgacggcgacagagccgcg
tgcttctacagccccgggcaggaagggggcgcggggggcccggaggacggggaggaggga
gaggacgccggggaggaggaggggtgcggggcccccctgggcgcgaacgtgacgcgccag
gtctgctgctgcacggtcggcacctcgtggggcagctgcgacgggcagcgctgcccgcac
ttcggctcagccgagttccgggagatgtgtcccaaggggaggggctacatccccacgggg
gactccgtgtacagcgcggggagggggcgctacagagacgcggacgagtgcgagctgttc
ggcgccgagatctgccagcagagcttctgcatcaacacggagcccggctaccagtgcttc
tgccgcgcggggttcgactacgaccccatgaagatgcagtgcttcgatgtggatgagtgt
atggacggctcgagctgcgtggggggggagtgcgtgaacaccccaggctcctacaactgc
ttttgtcgccccccgcaagtcctcgacgccaccggccgccgctgcggaaacagctccacc
ccggacgatgtgccggaggagatggacatccacatggacctgtgctggaagcgcgtgagc
agcgacttcatgtgcagcagccccatcgtgggcaaacagacgacctacacggagtgctgc
tgcctctacggggaggcgtggggccacgagtgtgccctctgccccatgcgcacgtccgct
gactatgcccagctgtgtaatctgccccgcgcgggtgatgggggcccggggaggaccctc
cacgagggctctcactacggggaggatatgcacggccccccctacctggagccggggttc
gcgtacccaggggggcccgagccccaccccgggatgctgcccctctacatcacggacgga
gacggctactacggcgagggttcggagggactgcagggggaggaatgcggcatcctgagc
ggctgtgagaatgggcgctgcgtgcgcgtgcgtgaggggttcacgtgcgagtgcgacccg
ggcttccagctggacaactcgcgcatgcagtgcctggacgtagacgagtgcgaggagtcc
aacccgggtggccctctctgctccaatggccactgcacgaacacggagggctccttcagg
tgcagctgcccccagggcacggccctgggccccgacgggcgcgtgtgcgagcctcaccgg
gcccccagggctcccagggctccaaaaccctccagggccccaaaaccctccaaagctccc
aaaccgtccagggctcagctgcgttcccaccgcgcccgcagggccccctag
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