KEGG   Pseudolactococcus raffinolactis: CMV25_00100
Entry
CMV25_00100       CDS       T05231                                 
Name
(GenBank) type I restriction-modification system endonuclease
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
lrn  Pseudolactococcus raffinolactis
Brite
KEGG Orthology (KO) [BR:lrn00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:lrn02048]
    CMV25_00100
Enzymes [BR:lrn01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     CMV25_00100
Prokaryotic defense system [BR:lrn02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   CMV25_00100
SSDB
Motif
Pfam: ResIII EcoEI_R_C SWI2_SNF2 DEAD Helicase_C DUF4145 HSDR_N SLFN-g3_helicase SNF2-rel_dom AAA_25 PhoH PALB2_WD40 Flavi_DEAD AAA_19
Other DBs
NCBI-ProteinID: ATC60380
LinkDB
Position
complement(20918..24142)
AA seq 1074 aa
MSNFSMLSNEWSFFATLGKQAEENIYRDPNVTLIKIRQFAEKMTEALFRLEKINSWNLDT
QLDKLRELERVGVLEDEITSVLHTIRKTGNKAAHDNYGNIAEAMNMVRYAHFLANWFMEV
YGPLNFSPIIFVEPKDIDKARADEIKQLKAQLELAEIEKLTFQAQLDEAAKKNENQPEDE
TKQNRRERSKKFLLNSHLNEKQTRLIFIDEQLRNSGWEVDTENIKWSKGSRPEKNHNKAI
AEVPTVNGSADYALFIGLDLVGVVEAKRYNKSAAGDISQAKEYAREIKSVSDYNIPSVFG
EYKAPFIYSSNGRPYLKQLQDQSGVWFWDARTPIKSSFALETWHSPEDLKQKLIVDEVKA
EKELKKEPYPDFANRDYQVNAVKVVEQGLAENKRRMLLAMATGTGKTRLALSLMYRLIKT
KRVRRILFLVDRRSLGTQAADALKDTKIENIAFSDIYDVKEVTDIMPEQDTKIQIATVQG
MVRRLFFKDDVEEIPSIGTYDFIIVDEAHRGYTEDKEMSEDEQYYQNEKDYVSQYRRVID
YFDATVLGLTATPALHTTQIFGAPIYTYSYTDAVVDGYLVDHEPPYKFETELSKNGIMFE
ADTEVEVWNDETKTIDKAHLEDELSFDIDKFNKQVITEPFNKAVLEGLTSYIDPNEDGKT
LIFAANDEHADLIVRLLKQAYRDDGIEVDDDAIEKITGYIRHPDKEIKLFKNEKYPNIVV
TVDLLTTGIDVPKIENLVFLRRVRSRILYDQMLGRATRLCPEIGKDAFRIFDAVHLYDHL
QNITDMKPVVSNPKQSIEEVLQKTLDATDDEEFGFFKAELIAKLQRKKQRISDDGEKEIV
ELNNIKNLDEWIQSIKTMSRFELETEAEKVLRIASYRTFRSPTIISHTKDTLIDVSRGYG
EDNVKPADYLNEFNQYIRDNINLIPALEIVVKRPKELTYQDLRQVQLRLKEKKFDEKALQ
EAWRQEKKEFIAADIISFIRQAALGTSLVDHETRIKRSMQKVYGMEAWTPKQLKWLKRIE
KQLLETSVLAPTAKQYFDETDVWRQKGGYKLAQRNIGDKVDNVIQLLNEELYAS
NT seq 3225 nt   +upstreamnt  +downstreamnt
atgagtaattttagcatgttaagtaatgagtggtcattttttgctacgctagggaaacaa
gcagaagaaaatatatatcgcgatccaaatgtgacgttaatcaaaattcgtcaattcgca
gaaaaaatgacagaagctttatttcgtcttgaaaagattaactcttggaatttggataca
caattagataaattgcgcgaactagagcgagtaggggtacttgaggatgagattacatct
gttcttcacacgattcgtaaaactggaaataaagcagctcacgataattatggcaatatt
gctgaagctatgaatatggttcgctacgcacattttttggctaactggttcatggaggtt
tatgggccattgaatttttcaccaattatattcgttgagccaaaagatattgataaagct
agggcagatgaaattaagcaattgaaggcacaattggaacttgctgaaattgaaaaactt
accttccaagctcagttagatgaggcagctaagaaaaatgaaaatcaacccgaagacgaa
acgaagcagaatcgtcgagaacgttcaaagaaatttctactcaactctcatctaaacgaa
aaacaaacaaggcttatatttatcgatgagcagttgcgtaattccggttgggaagtagat
actgaaaatattaagtggagcaaaggttcgagacctgaaaagaaccataataaagctatc
gcagaagttcctacagttaatggttctgcagactacgctttattcatcgggttagatttg
gtcggtgtagtagaagcaaaacgctacaataaatctgctgccggagatatttcccaagca
aaggaatatgcaagggaaattaagtcggtatcagactataacattccatcagtttttggg
gaatataaagctccctttatttattcatcaaatggtcgaccgtacttaaaacaattgcaa
gatcaatctggggtttggttttgggatgcacgtacaccgataaaatcttcctttgctttg
gaaacatggcatagtcctgaagatttgaagcaaaaattgattgttgatgaagtaaaagct
gaaaaggaacttaaaaaagaaccgtacccagattttgcaaatcgtgattatcaagtaaat
gcagttaaagtggttgaacaaggcttggctgaaaataaacgtcgtatgcttcttgcgatg
gctacaggtactggtaagacgagacttgctttatctttgatgtaccgtttgataaagaca
aaacgtgtacgtcgtattttatttttggttgaccgtagaagtcttggaacacaagcagca
gatgctttaaaagatacgaaaattgaaaatattgctttttctgatatttatgatgttaaa
gaagtaacggatatcatgcctgagcaggatacaaaaattcaaattgcaactgtccaaggg
atggttcgccgtttatttttcaaagatgatgttgaagaaattccctcaatcggaacttat
gactttattatcgttgatgaggcacatcgaggttataccgaagataaagaaatgtctgaa
gatgagcaatattatcaaaatgaaaaggattatgtaagtcaatatcgtcgtgtcattgat
tattttgatgcaacagtactaggtttaacagcaacaccagcgctccatacaacacaaatt
tttggtgcaccaatttacacctattcttatacagatgctgttgtggatgggtacttagtg
gatcatgagcccccgtataaatttgaaactgaattgtcaaaaaatggcattatgttcgaa
gctgatacagaagtagaagtttggaatgatgaaactaaaaccatagacaaggctcacttg
gaagatgagttaagctttgatattgataagtttaataagcaagtaattacagaacctttt
aacaaagcagtattagaaggtttaactagctatatagacccgaacgaagatggaaaaacg
ctcatttttgcagctaatgatgagcatgctgatttaatcgttcgtcttttaaaacaagcc
tatcgagatgatggtattgaggtagatgacgatgcgattgaaaaaattaccggttatatt
cgtcatcctgataaggaaatcaaactgttcaaaaacgaaaagtatcctaatattgtagtg
acggttgacttacttactactggtattgatgttcctaaaattgaaaatctagtgtttttg
agaagagttcgatcgcggattttatacgatcaaatgttgggacgcgctacacgtctttgc
ccagaaattggaaaagatgctttccgcatttttgatgcggttcacttatatgatcatttg
caaaacatcacggatatgaaaccagttgtttcaaatccaaagcaaagtattgaagaagtg
ctacaaaagacactagacgcaacagatgatgaagaatttggtttctttaaagcagagttg
atagctaaacttcagcgcaagaaacaacgaatcagtgatgatggtgaaaaagaaattgta
gagttaaataatattaaaaatcttgatgagtggattcaaagtatcaagaccatgtcaaga
tttgaacttgaaacagaagctgaaaaagtactgcgtatcgctagctaccgtacgtttaga
agtccgacgattatttctcatacaaaggatactttgattgatgtgagccgtggctatggg
gaagataatgtaaagcctgcagattacttgaatgagttcaatcaatatatacgtgacaat
atcaatttgatacccgctcttgaaatagtagtgaaacgacccaaagagcttacttatcaa
gatttgcgacaagtacagctacgccttaaagaaaagaaatttgatgaaaaagccttgcaa
gaagcttggcgacaagaaaagaaagaatttattgcagcggacatcatcagtttcatcagg
caagcagcattaggcacatcactagttgatcatgaaacacgcattaaacgttctatgcaa
aaagtgtatggtatggaagcatggacaccaaaacaacttaaatggttgaagcgcatcgag
aagcaattacttgaaacatctgtacttgcaccaactgcaaaacagtatttcgatgaaact
gatgtttggcgtcaaaaaggtggctataaactggcacaaagaaatattggagataaagta
gataatgttatccaactacttaatgaagagctctacgcttcttaa

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