Pseudolactococcus raffinolactis: CMV25_01915
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Entry
CMV25_01915 CDS
T05231
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
lrn
Pseudolactococcus raffinolactis
Brite
KEGG Orthology (KO) [BR:
lrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lrn03032
]
CMV25_01915
03036 Chromosome and associated proteins [BR:
lrn03036
]
CMV25_01915
03400 DNA repair and recombination proteins [BR:
lrn03400
]
CMV25_01915
DNA replication proteins [BR:
lrn03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
CMV25_01915
Chromosome and associated proteins [BR:
lrn03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
CMV25_01915
DNA repair and recombination proteins [BR:
lrn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
CMV25_01915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
DUF2267
HU-CCDC81_euk_2
HU-CCDC81_bac_2
Ribosomal_L27_C
Peptidase_C80
Glycos_trans_3N
APC_u13
Lmo2446-like_N
HU-DNA_bdg
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
ATC60722
LinkDB
All DBs
Position
complement(395369..395644)
Genome browser
AA seq
91 aa
AA seq
DB search
MANKQELIAKVAESADLTKKDAEKAVNAVFASVSEFLAKGEKVQLIGFGTFETRERAARE
GRNPQTGDSIKIAATTVPAFKAGKALKDAVK
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atggctaacaaacaagaattgatcgcaaaagttgcagaatctgcagatttgactaaaaaa
gacgctgaaaaagcagtaaacgctgttttcgcttcagtttctgaattccttgcaaaaggt
gaaaaagttcaacttatcggtttcggtactttcgaaactcgtgaacgtgcagctcgtgaa
ggtcgtaacccacaaactggagactcaatcaaaatcgcagcaacaactgttcctgcattc
aaagctggtaaagctttgaaagacgctgttaaataa
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