Lactococcus raffinolactis: CMV25_02050
Help
Entry
CMV25_02050 CDS
T05231
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
lrn
Lactococcus raffinolactis
Pathway
lrn00260
Glycine, serine and threonine metabolism
lrn00630
Glyoxylate and dicarboxylate metabolism
lrn00670
One carbon pool by folate
lrn00680
Methane metabolism
lrn01100
Metabolic pathways
lrn01110
Biosynthesis of secondary metabolites
lrn01120
Microbial metabolism in diverse environments
lrn01200
Carbon metabolism
lrn01230
Biosynthesis of amino acids
lrn01240
Biosynthesis of cofactors
lrn04981
Folate transport and metabolism
Module
lrn_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
lrn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
CMV25_02050 (glyA)
09102 Energy metabolism
00680 Methane metabolism
CMV25_02050 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
CMV25_02050 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
CMV25_02050 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
CMV25_02050 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
CMV25_02050 (glyA)
Enzymes [BR:
lrn01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
CMV25_02050 (glyA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
ATC60747
UniProt:
A0A290PXB0
LinkDB
All DBs
Position
complement(425230..426483)
Genome browser
AA seq
417 aa
AA seq
DB search
MIFDQPNYEAFDQELWDAIHAEEKRQQQNIELIASENVVSKAVMAAQGSLLTNKYAEGYP
GNRYYGGTECVDIAENLAIERAKELFGAKFANVQAHSGSQANAAAYLALIEPGDTVMGLD
LAAGGHLTHGSPVNFSGKTYNFVGYNVDKETELLDYDQILAQAKAAQPKLIVAGASSYSR
TIDFAKFREIADAVGAKFMVDMAHIAGLVAAGLHPNPVPYADITTSTTHKTLRGPRGGLI
LTNDEVLAKKINSAIFPGIQGGPLMHVVAAKAVAFKEALDPSYKDYQAQVIKNAKVMAET
FENAGLRVISGGTDNHMFMLNVTGFGINGKEAQHLLDTVSITLNKNAVPYETLSPFKTSG
VRIGSAAVTSRGFKEAQATKVAEFIIRAFQNKDDQAALDQIKSEVIALTDAFPLYEA
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgatatttgaccagccaaactacgaagcttttgaccaagaactctgggatgcaatccat
gcagaggaaaaacgtcaacaacaaaatattgaactcatcgcctctgaaaatgttgtttca
aaagctgttatggccgctcaaggctcacttttgactaacaaatatgctgaaggctatcct
ggtaatcgctactatggcggtactgaatgcgttgatattgctgaaaatttagcaattgaa
cgcgcaaaagaactttttggcgctaaatttgccaatgtgcaagctcactcaggctcacaa
gccaatgctgcagcttaccttgctttaatcgaacctggtgacacagtcatgggtcttgat
ttggcagctggtggtcatttgacacacggctcaccagtcaacttctctggtaaaacgtat
aactttgttggctataacgtcgataaagaaactgaattattggattatgatcaaatttta
gcgcaagctaaagcggcgcaacctaaattgattgtcgctggtgcgtctagctattcacgc
acaattgattttgcgaaattccgtgaaatcgctgatgctgttggtgcaaaattcatggtt
gatatggcacatattgctggtttggtggctgctggtctgcatccaaatccagtaccttat
gctgatattacaacttctacaacccataaaacactccgtggcccgcgtggtggactcatt
ttgacaaatgacgaagttttggctaagaaaattaactctgccatcttcccaggaattcaa
ggtggtccattgatgcacgttgtcgctgcaaaagctgttgctttcaaagaagcattggat
cctagctacaaagattatcaagcacaagtcattaaaaatgcaaaagtcatggctgaaacc
tttgaaaatgctggtttgcgcgtgatttctggtgggactgataaccacatgttcatgctt
aatgtcactggctttggtatcaatggtaaagaagcacaacatctcctggatacagtgtca
attactttgaacaaaaatgcagtaccttacgaaacgttgagcccatttaaaacatcaggc
gtccggattggttcggctgctgtgacatcacgtgggttcaaagaggcacaagcaacaaaa
gtagcagaatttatcattcgtgctttccaaaacaaggacgaccaagcggcgcttgatcaa
atcaaatcagaagtgattgccttgacggatgctttcccactttacgaagcttaa
DBGET
integrated database retrieval system