Pseudolactococcus raffinolactis: CMV25_04540 Help Entry CMV25_04540       CDS       T05231                                  Symbol rpoN Name (GenBank) RNA polymerase sigma-54 factor   KO K03092   RNA polymerase sigma-54 factor Organism lrn  Pseudolactococcus raffinolactis Pathway lrn02020   Two-component system lrn02040   Flagellar assembly Brite KEGG Orthology (KO) [BR:lrn00001]  09130 Environmental Information Processing   09132 Signal transduction    02020 Two-component system     CMV25_04540 (rpoN)  09140 Cellular Processes   09142 Cell motility    02040 Flagellar assembly     CMV25_04540 (rpoN)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:lrn03021]     CMV25_04540 (rpoN) Transcription machinery [BR:lrn03021]  Prokaryotic type   Bacterial type    RNA polymerase     Sigma factors      CMV25_04540 (rpoN) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Sigma54_DBD Sigma54_CBD Sigma54_AID HTH_17 HTH_12 Sigma70_r4 HTH_IclR CUB_M02D8_5_4th Motif Other DBs NCBI-ProteinID:  ATC61192 UniProt:  A0AAE7CTT8 LinkDB All DBs Position 914316..915659 Genome browser AA seq 447 aa AA seqDB search MSQKPSINLKQSQTQQQKLAMTQTMQQAIQILHFSTNDLRDYLREQSLDNPLISVSNSSD SFEPPQINRGLNQASEDRHQAFLEQLPAEKVSLYEHVLAQIHLNYRDTFLRTLLLFLVEY IDANGYLTLSLDAAATKTGATEIQLLDALTLLQQLEPAGIGARNLQECLMLQTERDHAAP DIAYLLLEESFNDLVNRQWEGISQKYAVSFPEIQAVFDYIPTLTPRPGAAYAQTLAQYIK PDLEVTVSGQHLDIQSTKAGQPQITFQDKYYNRYKEIEDVELQAYLKDRKAEFDWLKTTV ENRGETILRVGQEILRHQSDFFLDDRHPLKPLTLKEVAQSLDLHESTISRAVNQKYMRTP WGIYELKHFFPQGILQKNGEATGEVVANTAIKSELQNIVANENKQAPLSDQKIVDQLKQA GFDISRRTVVKYRDALGIPTSRNRKRY NT seq 1344 nt NT seq  +upstreamnt  +downstreamnt atgtcacaaaaaccatccattaacttgaagcaaagtcaaacgcagcaacaaaagcttgcc atgacacaaaccatgcaacaggctattcaaattctacactttagcacaaacgatctaaga gattatttgcgggagcaatctcttgataatccactcatttcagtgagtaatagttcagat tcttttgagcccccacaaatcaaccgtggcttaaatcaagcatcggaggatcggcaccaa gcttttctggaacaattacccgcagagaaagtatctctctatgaacatgttttggcgcaa attcacctcaactatcgcgatactttcttacggacactcttgctttttttagttgaatac atagatgccaatggttacctaacactctctcttgatgctgctgcgacaaaaacaggcgcg actgagatccaactgcttgacgccttgacactattgcaacagttagaaccagccggtatc ggggcacgaaacttgcaggaatgtctgatgctccaaaccgaacgtgaccatgctgcacct gatattgcttatttgctcttagaagaaagctttaatgatttggtcaatcgacaatgggag ggcattagtcaaaaatacgcggttagctttcctgagatacaagccgttttcgactatatc ccgaccctgacacctcgaccaggtgcggcttacgctcaaacacttgcacaatatatcaaa cccgatttagaggtaacggttagtgggcagcaccttgacatccagtcaaccaaggcaggt caaccacagattactttccaagacaagtactacaatcgctacaaagagatagaggatgtt gaattacaagcctatctcaaagaccgaaaagctgagtttgattggttaaagacaactgtt gaaaatcgtggggaaaccattcttcgggtcggtcaggaaattttacggcaccagtctgac tttttcttagatgaccgtcacccgcttaaaccgctcaccttaaaggaagttgcccaaagt ttagacctacacgaatcaaccatcagtcgcgcagtcaatcaaaaatacatgcgcacgcct tggggcatttatgaattaaaacactttttcccacaagggattctgcagaaaaatggcgag gcaactggcgaagtggttgccaataccgcgatcaaatcggagcttcagaatattgtcgca aatgaaaataaacaagcgcctttgtcagatcagaaaattgttgaccaactgaaacaagca ggctttgatatctcacgccgaaccgtcgttaaatacagggatgctttaggtattccaacg tctcgcaatcgaaaacgatattaa

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