Pseudolactococcus raffinolactis: CMV25_06080
Help
Entry
CMV25_06080 CDS
T05231
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
lrn
Pseudolactococcus raffinolactis
Pathway
lrn00521
Streptomycin biosynthesis
lrn00523
Polyketide sugar unit biosynthesis
lrn00525
Acarbose and validamycin biosynthesis
lrn00541
Biosynthesis of various nucleotide sugars
lrn01100
Metabolic pathways
lrn01110
Biosynthesis of secondary metabolites
lrn01250
Biosynthesis of nucleotide sugars
Module
lrn_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
lrn00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
CMV25_06080 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
CMV25_06080 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
CMV25_06080 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
CMV25_06080 (rfbB)
00525 Acarbose and validamycin biosynthesis
CMV25_06080 (rfbB)
Enzymes [BR:
lrn01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
CMV25_06080 (rfbB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
NAD_binding_4
3Beta_HSD
Polysacc_synt_2
RmlD_sub_bind
adh_short
NAD_binding_10
KR
NmrA
Sacchrp_dh_NADP
Motif
Other DBs
NCBI-ProteinID:
ATC61456
UniProt:
A0AAE7CRK2
LinkDB
All DBs
Position
1209959..1211008
Genome browser
AA seq
349 aa
AA seq
DB search
MTELKKIIVTGGAGFIGSNFVHYVYNNHPEIEKIIVLDKLTYAGNKANIAEILGDRVELV
VGDIADADLVDKLAGQVDAIVHYAAESHNDNSLKSQDEFIHTNFIGTYTLIQAARKYDLR
FHHVSTDEVYGDLPYREDLPGHGEGEGEKFTDHTPYNPSSPYSSTKAASDLIVRAWVRSF
GLKATISNCSNNYGPYQHIEKFIPRQITNILAGIRPKLYGDGKNVRDWIHTEDHSSGVWT
ILTKGVIGETYLIGADGEKNNKEVLEEILTEMGQEATAYDRVTDRAGHDLRYAIDNTKLR
TELGWAPKHTDFESGLKDTIKWYTDNKDWWEAEKAAVEANYAKSQEVLK
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgactgaattaaaaaaaataatcgtaacaggtggcgcgggttttatcggctcgaacttt
gtacactatgtgtataataaccaccctgaaattgaaaaaattatcgttttagacaaattg
acttatgctggcaacaaagccaatattgctgagattcttggtgatcgtgttgagcttgtc
gttggggacattgctgatgctgatttggttgataaattggcaggtcaagtcgatgctatc
gtccactatgcagctgagtcacataatgacaactcactcaaatctcaagacgagttcatc
cacaccaactttatcgggacttatacgttaattcaagcggcacgtaaatatgatttgcgt
ttccaccatgtctcaacggatgaagtctatggcgatttgccttaccgtgaagatttacca
ggtcatggcgaaggtgaaggtgagaaatttacggaccacacaccttacaacccaagctca
ccttactcttcgacaaaagcagcgagtgacttaatcgttcgcgcctgggtccgctcattt
ggtcttaaagcaacgatctctaactgttcaaacaactatggtccataccaacatatcgag
aaatttatcccgcgtcaaattaccaatattttagcgggtatccgtccaaaactttatgga
gatggtaaaaatgtccgtgactggatccacacagaagatcattcttcaggtgtttggaca
attcttactaaaggtgtgatcggtgaaacttacctaatcggtgctgatggcgagaaaaac
aacaaagaagtcttggaagaaatcttgactgaaatgggtcaagaagcgacagcttatgac
cgcgtgacagaccgtgcaggacatgacttgcgctatgcgatcgacaatacgaaacttcgc
acagagcttggttgggcgcctaagcatactgactttgaatctggtttaaaagatacgatt
aaatggtacacagacaataaagactggtgggaagctgaaaaagcagcggtcgaagccaac
tatgctaaatcacaagaggtattaaaatga
DBGET
integrated database retrieval system