Pseudolactococcus raffinolactis: CMV25_06090
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Entry
CMV25_06090 CDS
T05231
Name
(GenBank) glycosyl transferase
KO
K12996
rhamnosyltransferase [EC:2.4.1.-]
Organism
lrn
Pseudolactococcus raffinolactis
Brite
KEGG Orthology (KO) [BR:
lrn00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
lrn01005
]
CMV25_06090
Lipopolysaccharide biosynthesis proteins [BR:
lrn01005
]
O-antigen repeat unit
CMV25_06090
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DUF1972
Glycos_transf_1
Glyco_transf_4
Motif
Other DBs
NCBI-ProteinID:
ATC61458
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Position
1212148..1213290
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AA seq
380 aa
AA seq
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MQHVFIIGSRGLPAQYGGFETFVDELVSHQQSDQVKYHVANLSKTATGRHVDYKTADVFD
VKARHFGGANVIFYDRDAINYALSYIKHHNITTPIFYVLGNTLGAFMGHYARKIHKIGGR
LFVNPDGLEWQRSKWIKPIQVYLKYSERRMAKIADLIISDNQGIEDYLKVEYGKINSTVI
AYGTNPIVQGQTFDQTWFDKQDIQSKNYYLIVGRFVPENNYEAIIRAFMASDTKRDLVIV
TNHAGNPYFDVLRQATGFDQDKRIKFVGTVYDKVLLIAIRQKAFAYLHGHAVGGTNPGLL
EAMSATDLNLVFDVSFNRNVALSSALYWQKDTLTDLIAEAEKLSLSEIEALTVEARDIIA
EKYTWAGIVDQYERLFLNEG
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgcaacacgtgtttataattgggtcgcgcggcttgccagctcagtatggtggctttgaa
acatttgttgatgaactggtgagtcatcaacagtcagatcaggtcaaataccatgttgcc
aacttgtcgaaaacggcaactggtcgacatgttgactataaaacagcagatgtatttgat
gttaaagcaagacattttggtggcgccaatgtgattttttatgatcgagatgctatcaat
tacgctttaagttatatcaaacatcataatattacaactcccattttttatgttttgggg
aataccttaggtgcttttatggggcactatgccagaaaaattcataaaattggaggacgt
ttgtttgtcaatcccgatgggttagaatggcaacgaagtaaatggattaagcccattcag
gtgtatctgaaatattctgagcgccgtatggcgaaaattgcagatttgattatttcagat
aatcaaggaattgaagattacttgaaggttgagtacgggaagataaactcaacagtcatt
gcttacggtacaaatcctatagttcaaggtcaaacttttgaccagacttggtttgataag
caggacattcaatctaaaaattattatctcattgttggtcgctttgtgcctgaaaataat
tacgaagctattatccgtgcctttatggcatctgacacaaagcgtgatctggttattgtg
accaaccatgcagggaatccttattttgatgtgttgcgtcaagctacaggttttgatcag
gacaaacgcatcaaatttgtcggaacggtctatgataaagtgttgttgattgctattcga
caaaaagcctttgcctatctgcatggtcatgccgttggggggacgaatcccggtttgctg
gaagctatgagtgcaacggatttaaacttagtttttgatgtgagctttaaccgcaatgtt
gccctgtcttcggctttgtattggcaaaaagatactttaacagacttgattgctgaggca
gaaaaattaagcttgtcagagattgaagcgctaacagtagaagcgcgtgatattattgct
gaaaaatacacttgggcaggcattgtagaccagtatgagaggttgtttttgaatgaaggt
taa
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