Lactococcus raffinolactis: CMV25_06730
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Entry
CMV25_06730 CDS
T05231
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
lrn
Lactococcus raffinolactis
Pathway
lrn03030
DNA replication
lrn03410
Base excision repair
lrn03420
Nucleotide excision repair
lrn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lrn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CMV25_06730 (polA)
03410 Base excision repair
CMV25_06730 (polA)
03420 Nucleotide excision repair
CMV25_06730 (polA)
03440 Homologous recombination
CMV25_06730 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lrn03032
]
CMV25_06730 (polA)
03400 DNA repair and recombination proteins [BR:
lrn03400
]
CMV25_06730 (polA)
Enzymes [BR:
lrn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CMV25_06730 (polA)
DNA replication proteins [BR:
lrn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CMV25_06730 (polA)
DNA repair and recombination proteins [BR:
lrn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
CMV25_06730 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CMV25_06730 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
ATC61579
UniProt:
A0AAE6YJT3
LinkDB
All DBs
Position
1341604..1344219
Genome browser
AA seq
871 aa
AA seq
DB search
MTTTEKKLLLIDGSSIAFRAFFALYTQIDRFVAPSGLHTNAIFAFHTMLRNVLDSVQPTH
VLVAFDAGKTTFRTEMYADYKGGRAKTPDEFREQMPFIKEMLEAQGIKHYELANYEADDI
IGTLATQAENGGFDAVTVVSGDRDLTQLTTDKTTVEITIKGVAELETYTPAYLKEKLGLT
TAQFIDLKALMGDKSDNIPGVTKIGEKTGIKLLLEYGSLQGIYDHVDGMKTSKMKENLIN
DREQAFLSKELATIDLDSPIEIQLDDTIFQGADYDRLKKFYQEMGFQKFLEDLEGVTEKV
IEELAFTVVEDAVTLDMFHDDQFFYLEILGEDYQREPIIGFAWGDDKTIYVSKNVDLLKD
FHFPKNTFDFKKNKVLLGRHGIDYPLVAFDTMLAKYLYSTIENNKISTIADLFGLNLPDD
DVVYGKGAKRAVPFDDVLYDHLARKVDILVKTKAALLDKLRENDQEKLLSDMELPLANVL
AKMEMAGIKVSGGVLSEIGLENEKVIADLTAEIYELAGETFNINSPKQLGVILFEKMQLP
VIKKTKTGYSTAVDVLEQLAPQAPIVDKILKFRQISKIQSTYVTGLLGEIMADGKIHTRY
IQDLTQTGRLSSVQPNLQNIPVRLAEGRKIRKAFLPEKSESVLLSSDYSQIELRVLAHIS
GDEHLIAAFNDGADIHTATAMRVFGIEKPEDVTPNDRRNAKAVNFGVVYGISDFGLSNNL
GITRKAAKTYIDTYFERYPDIKKYMEDIVRSAKDKGYVETLYHRRRNLPEINARNFSVRS
FAERTAINSPIQGSAADILKVAMINLDRALAAGGYQAKMLLQVHDEIVLDVPHDELDAIK
ALVKTTMEEAIDLKVPLLVDENSGKTWYEAK
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atgacaactacagaaaaaaaactactattaatagacggctcatccattgcttttcgggcc
ttttttgcgctttacacgcagattgaccgctttgttgcgccatctggtttgcacactaat
gcgatttttgccttccataccatgttgcgcaacgtcttggattcagtccaacccacacac
gtgctcgtcgcttttgatgctggtaaaacgacgtttcggacggaaatgtacgctgactat
aaaggtgggcgtgcgaaaacgcccgatgaattcagagagcagatgccatttatcaaagaa
atgctagaggcccaagggattaagcactatgaactggctaactatgaggctgatgatatc
atcggaactctggcgacccaggccgaaaatggtggctttgatgcggtaacggttgtttca
ggcgatcgagatttgacccagctgaccacagataaaacgacggtggaaatcacgattaag
ggtgtggctgaacttgaaacctacacgccggcttacctgaaagaaaaactaggcttaaca
acggcacaatttatcgacttgaaggccctcatgggtgataagtcagataatatccctggc
gtaaccaaaatcggtgaaaaaaccgggatcaaattactgttagaatacggctcgctccaa
ggcatttatgatcatgtcgatggcatgaaaacgtctaaaatgaaagaaaacttgatcaat
gatcgtgagcaagctttcttgtcaaaagaactggcaacgattgatctggattcaccaatc
gaaatccaactggacgatacgattttccaaggcgctgactatgacagactcaagaaattt
tatcaagagatgggttttcagaaatttttggaagacctcgaaggtgtgactgaaaaggta
atcgaagaactggcctttacagttgttgaagacgctgtgacgcttgacatgtttcatgat
gatcaatttttctatctggaaattctgggtgaggattaccaacgtgaaccgattattggt
tttgcttggggtgatgacaagacgatttatgtctcaaaaaacgtcgatctactcaaagac
ttccatttccctaaaaacacctttgatttcaagaaaaacaaggtcttactaggccgccat
ggcatcgactatccgctggttgcatttgataccatgcttgccaaatacctctattcgacg
attgaaaataataaaatttcaacgattgcagatttatttggtctgaatttaccagacgat
gatgtggtctatggtaaaggcgctaagcgtgcggtgccatttgatgatgtcctttatgat
catctcgctcgaaaagtagatatccttgtcaaaacaaaagcagccttgcttgataagcta
cgagaaaatgatcaggaaaaactcctatcggatatggagttaccgctcgccaatgtcctt
gccaagatggaaatggcaggcattaaagtgtcaggcggtgtcctaagtgaaatcggcttg
gaaaatgaaaaagtcattgctgatttgacggcagaaatttacgagcttgcaggtgagacc
ttcaatatcaactcaccgaaacaactaggtgtcattctatttgaaaaaatgcagctaccg
gtcattaagaaaaccaaaacaggttattcaacggctgttgacgtcctggaacagttagca
ccccaagcaccaatcgttgataagattttgaagttccgtcaaatttctaaaatccagtca
acctatgttacaggtctgctcggtgagattatggctgatggcaagattcatacgcgctat
attcaggatttgacccaaacgggtcgtctgtcaagtgtgcagcccaatctccaaaatatt
ccagttcgattggctgaaggtcgtaagattcgcaaggctttcttacctgaaaaatcagag
tcagttttactatcaagtgactattcacagattgaattacgggttcttgcccacatttca
ggggatgaacatttgattgcggcctttaacgatggtgctgacatccatacggcaacggcg
atgcgcgtgtttggtatcgagaaaccagaagatgtgacgccaaatgaccgtcgtaatgcc
aaagccgttaacttcggtgttgtctacggtatttctgatttcggtctgtctaataatctg
gggattactagaaaagctgccaaaacgtatattgacacgtattttgagcgttatcctgat
attaaaaaatatatggaagacatcgttagaagtgctaaggataaaggatatgtcgaaacc
ctctatcacagaagacgtaatctaccagaaatcaatgcaagaaacttctctgtccgttca
ttcgcagagcgtacagctattaacagccccattcaaggatcagcagctgatatcttgaaa
gtggccatgatcaaccttgatcgcgccttagcagcaggtggctaccaagccaaaatgttg
ctacaagtacacgatgaaatcgtattggatgtcccacatgatgaactagatgcgattaaa
gccttggttaaaacaaccatggaagaagcaatcgacctaaaagtcccactcttagttgat
gaaaatagtggcaagacttggtatgaagcgaaataa
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