Pseudolactococcus raffinolactis: CMV25_08590
Help
Entry
CMV25_08590 CDS
T05231
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
lrn
Pseudolactococcus raffinolactis
Pathway
lrn02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
lrn00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CMV25_08590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lrn03021
]
CMV25_08590
Transcription machinery [BR:
lrn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CMV25_08590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
DBD_HTH
DUF6432
Motif
Other DBs
NCBI-ProteinID:
ATC61914
UniProt:
A0A290Q084
LinkDB
All DBs
Position
1725891..1727021
Genome browser
AA seq
376 aa
AA seq
DB search
MVETKKDSKKIFSVFDVTVAEFIRDHKKLGQAVDDDITVELITEFGLDADGIEALLTKIQ
DAGISIVDKKGEPSVMALESTKIDEKEAEEEVEEIVTNVRIDDPVRMYLKEIGRFPLLTF
DEETRLAEAIVAGGEEGEMAKQMLAEANLRLVVSIAKRYSGRGMQFLDLIQEGNMGLMKA
VDKFDHTKGFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRIQRQLLQDLG
RDPSPEEIGAEMDIKPERVREILKIAQEPVSLETPIGEEDDSHLGDFIEDDAIESPVDYT
NRVMLREQLDEVMDTLTDREENVLRMRFGLDDGRMHTLEDVGKQFKVTRERIRQIEAKAL
KKLRHPRRSKQLRDFM
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
ttggtagaaacaaaaaaagatagtaaaaaaatcttctcagtatttgacgttacggttgca
gaatttattcgcgaccataaaaaattaggtcaagctgtagatgatgatattacggttgaa
cttatcacagaatttggattagatgctgacggtattgaagcgctactcacaaaaattcag
gatgctggtatctcaatcgttgataaaaaaggtgaaccatcagtgatggcacttgaatcg
acaaaaatcgatgaaaaagaagctgaagaagaagtcgaagagattgtgaccaatgtccgt
attgatgatccagtacggatgtacttgaaagaaatcggtcgcttcccacttttgacattt
gacgaagaaacacgtttagccgaagcaattgttgcgggtggtgaagaaggcgagatggct
aaacaaatgcttgctgaagccaacctacgtctcgttgtatctattgccaaacgttattct
ggtcgtggcatgcaatttcttgatctaattcaagaaggtaacatgggcttaatgaaggcc
gttgacaaattcgatcacaccaaaggtttcaaattctcaacttatgcgacgtggtggatt
cgtcaagccatcacacgtgccattgctgaccaagcgcgcacgattcgtattccagtccac
atggttgaaacgatcaacaaattgatccggattcaacgccaactcttacaagatttaggt
cgcgacccatctcctgaggaaattggtgcagaaatggatatcaaaccggaacgcgtgcga
gaaatattgaagattgctcaggaacctgtatcgcttgaaacaccaatcggtgaagaagat
gattcacatttgggtgattttatcgaggacgatgcgattgaaagtccagttgattacacc
aaccgtgtgatgttacgtgagcaacttgacgaagtcatggataccctgactgatcgtgaa
gaaaacgtccttcggatgcgctttggtctagatgatggccgcatgcacacattggaagat
gttggcaaacagttcaaagtaactcgtgaacggattcgtcaaattgaagccaaggctttg
aaaaaattacgtcatccaagacgtagcaaacaattacgagattttatgtaa
DBGET
integrated database retrieval system
