Pseudolactococcus raffinolactis: CMV25_10885
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Entry
CMV25_10885 CDS
T05231
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lrn
Pseudolactococcus raffinolactis
Pathway
lrn03420
Nucleotide excision repair
lrn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lrn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CMV25_10885 (pcrA)
03430 Mismatch repair
CMV25_10885 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lrn03400
]
CMV25_10885 (pcrA)
Enzymes [BR:
lrn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CMV25_10885 (pcrA)
DNA repair and recombination proteins [BR:
lrn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CMV25_10885 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
CMV25_10885 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
ResIII
DUF4494
Pox_VLTF3
Motif
Other DBs
NCBI-ProteinID:
ATC62332
LinkDB
All DBs
Position
complement(2210397..2212688)
Genome browser
AA seq
763 aa
AA seq
DB search
MNPLLQGMNERQAEAVQTTEGPLLIMAGAGSGKTRVLTHRIAYLIEEKMVNPWNILAITF
TNKAAREMRERAIDLNPRTQDTLIATFHSMCVRILRRDADHIGYNRNFTIVDPGEQRTLM
KRILKELNVDPKKFTERTILGTISNSKNDLVTAESYAKNANDLYTEIVAKAYKRYETELK
RSESMDFDDLIMNTILLFDKNPDVLAYYQGKFQYIHVDEYQDTNHAQYQLVQLLAKRFKN
LCVVGDADQSIYGWRGADMQNILDFEQDYPEAKVVLLEENYRSTKTILQAANEVINNNKK
RRPKKLWTQNADGENIIYHRSGDEREEANFVAGQINHELQENKRQYSDFVVLYRTNAQSR
AIEEALLKSNIPYTMVGGTKFYSRKEIRDVVAYLNVIANVRDNISFERIVNEPKRGVGPK
ALETLRDFAAQQNVSLLEASRDVTLSSLKGKAASELFNLAHTLLNLADDVDQFTITELVE
KVLDKTTYKKALEVQTTSLEAQNRLENIEEFLTVTKSFDDKEAENAVEGETGLDKLSRFL
NDLSLVADTDSYDETSQVTLMTLHAAKGLEFPVVFLVGMEEGVFPLSRQAEDEDELEEER
RLAYVGITRTEEVLYMTNASSRMLFGRSSYNQPSRFLREIDDELLTYTGQARKANTAFNA
TYKSSSTSSRSQFGSGVSLADAIKGRKSAVSSTGSVSARQGATDKPVGDWSIGDTAHHKK
WGDGTVLDVSGTGSNMELKIAFPEVGLKRLLAQMAPIEKVEKN
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgaatccattattacaaggtatgaacgagcgtcaagcggaagcagtacagacaacagaa
gggccacttttgatcatggcgggagcgggttctggcaagacccgcgtcttgacccacaga
atcgcctacctcattgaagaaaaaatggttaatccttggaatatccttgcgattaccttt
accaataaagctgcgcgggaaatgcgcgagcgggcgattgacctcaatcctcgcacgcag
gataccctcatcgccaccttccatagcatgtgtgtccgcatccttcgtcgtgatgctgat
catatcggctacaaccgcaatttcaccatcgtcgatccgggtgaacaacgcaccttgatg
aaacgtatcctaaaagagctcaacgttgacccgaaaaaattcacagagcgcaccattcta
ggcaccatttctaatagcaaaaatgacctcgttacagcagagagctatgccaaaaacgcc
aacgacctctacacagaaattgtcgccaaggcttacaaacgctatgaaacggagctcaag
cgcagcgagtctatggatttcgacgacctgatcatgaacaccatcctccttttcgataaa
aatccagatgttctggcttattatcaaggtaaatttcagtacattcacgtcgatgagtac
caagataccaaccatgcccagtatcaattggtgcagctcctcgctaagcggtttaaaaac
ttgtgcgtcgtaggggatgcagaccaatctatttatgggtggcgtggcgctgatatgcaa
aacattttggattttgagcaggactaccctgaggccaaagtcgttttgctagaagaaaat
tatcggtcaaccaaaaccattcttcaagctgcaaatgaagtcatcaataacaacaaaaaa
cgtcgccctaaaaaactctggacgcaaaacgctgacggggaaaacatcatttatcaccgt
tctggtgatgaacgtgaagaggccaattttgttgcgggacaaattaaccatgaactgcaa
gaaaacaagcgtcagtattcagactttgttgttttatatcgcaccaacgcccagtctcgt
gcaatcgaggaagcgctccttaaatctaacattccttacaccatggtcggcggcactaaa
ttctactctcgtaaagagattcgggacgttgttgcttacctcaatgtcattgccaatgtt
cgtgataacatctcgtttgagcggatcgtcaatgaacctaaacgcggcgtcggtcctaaa
gcgctagaaacgctccgtgattttgcggcgcaacaaaatgtttctttgctagaagcgtca
cgagatgtcacgctcagctcgctcaagggcaaggcggcatctgaactctttaatctggcc
cataccctgctcaatctagcagatgatgtggaccagtttaccatcactgaattagtcgaa
aaagtcctagataaaacgacctataaaaaagcgctggaagttcagaccaccagtctggaa
gcccaaaaccgtctggaaaatatcgaagagtttctgacggttaccaaaagctttgacgat
aaggaagctgaaaacgcagttgaaggcgaaacaggcctggataaactcagccgtttcctc
aacgacctcagtctggtcgcggacaccgacagctacgatgaaacctcgcaagtgaccctc
atgaccctgcacgccgccaaaggcctagaatttccggtcgttttcctcgtcggcatggag
gaaggcgtctttccgctcagtcggcaagccgaagatgaagacgaattagaagaagaacgc
agattagcttacgtcggcatcacacgaacagaagaagttttgtatatgacaaatgccagc
tcccgcatgctctttggccgttcaagctataatcaaccgtcacgtttcttgcgtgaaatt
gacgatgagttattgacttatacaggacaggctagaaaagctaatacagcctttaatgca
acttataaatcttctagcacatcatcaagaagccaatttggctcaggcgtcagcttggcc
gatgccataaaaggccggaaatccgctgtctcatcgactggctcagtttcagcaagacaa
ggcgcgacagataaaccagttggcgactggagcatcggcgacaccgctcaccataaaaaa
tggggtgatggtacggtattagatgtatccggtaccggttcaaacatggaattgaaaatc
gccttcccagaagttggcttaaaacgccttctggcccaaatggcaccgattgagaaggtt
gaaaaaaactga
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