Labeo rohita (rohu): 127155418
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Entry
127155418 CDS
T09007
Symbol
flt1
Name
(RefSeq) vascular endothelial growth factor receptor 1 isoform X1
KO
K05096
FMS-like tyrosine kinase 1 [EC:
2.7.10.1
]
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04010
MAPK signaling pathway
lroh04020
Calcium signaling pathway
lroh04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
127155418 (flt1)
04020 Calcium signaling pathway
127155418 (flt1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
127155418 (flt1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
lroh01001
]
127155418 (flt1)
Enzymes [BR:
lroh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
127155418 (flt1)
Protein kinases [BR:
lroh01001
]
Receptor tyrosine kinases (RTK)
VEGFR family [OT]
127155418 (flt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Ig_3
I-set
Pkinase
Ig_2
VEGFR-1-like_Ig-like
ig
V-set
Ig_4
VEGFR-2_TMD
Izumo-Ig
C2-set_2
Ig_5
C1-set
C2-set
Haspin_kinase
Motif
Other DBs
NCBI-GeneID:
127155418
NCBI-ProteinID:
XP_050953554
LinkDB
All DBs
Position
24:13527364..13573941
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AA seq
1291 aa
AA seq
DB search
MFDILFVIIFGLTGRVLTKDTDTKGRFSSPVLDVTEKQLIIERNQTLQLNCRGRWELQWV
LPSGVPKVYHGTQIEDTRCGKKNNQYCSRLTLSPALAQHTGSYRCRYHQKQRKQASVYVY
ITDSQQPFVKVQTEIPDVVYMKEGEPLVFPCRVTNPDAKVSLVKFPFHRLTPDYRNIIWN
SRQGFTIRSPTFFYIGLFSCETIVNGVKHSNKFLTHRPVNKILDVYLNSTGLVHTLQGQM
LALNCTVTAEWNARVSISWTYPQKANGSATIIRRISKSRTNMLFYSVLTIPRLSKADRGL
YKCHVTSGPSKRETNTTVIVYDHPFIRLKHRDGPVVQASAGQKFFRLTPKLRAFPAPEII
WLKDGMVAAERCSRYHVDGFSLVIRDIAEEDAGIYTIRTGIQQYGLFQNLTLTLVVNVKP
QIGEKTVSSQHPATVQRGSRQALHCTSHGVPPPQIQWLWHPCPPKGLCEKPPPSSWTAVS
EKTEVTSTHNPILTVSHRQEVLEGKNKTVGVLTVGEALKSGIYRCVASNLMGRDELDIHF
YVTDVKGGLIVSLEEEPREGGDLRLVCIANRHLYSDLSWYRLTNQSTASEGASVLSGELT
EGQFSHTLHLLLKNVTAQDSGTYRCSATHLLTEEHSHLDTAVEVTVLQAPVLLQNLSDHS
VNVSNSVTLRCPSRGIPHPRITWYKDQRKLQQVSGIMLFPEEGTLHIDRITAEDQGLYTC
KANNERGSVESSAHIWVQSSSESLSLEIPTLACTCVVATLFWLLLTLLIRKLKQPTSTNG
KAEYLPIILHPGEEPLVEHCDRLQYDPAQWEFPRDRLKLEKPLGRGAFGRVMQASAFGIC
NSASCTTVAVKMLKDGATPSEHKALMTELKILNHIGHHLNVVNLLGACTKQGGPLMVIVE
YCKFGNLSAYLKSKREVFLLNRVNREEEGGMKEGYKGRLASVSSSQSNASSGFSEEKGEI
SEEDSGSLPESNNPLLLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLSNNNVVKIC
DFGLARDVYKDPDYVRKGDARLPLKWMAPESIFDKVFTTQSDVWSYGVLLWEIFSLGASP
YPGLNIDEEFCHRLKQGTRMCPPEYSTPEIYSIMMACWENNPEDRPSFSALVEILGDLLQ
TCVQQDGKDYIPLNAFISGEGNTVTAHLDQKDISQKTLGTSSYINSGKIKAISTFEDLHK
EVPDDNQSDSGMVLPSEELIQVKWMDRFKTKNITKFFSKGQNQHMTLPAKALPCMNSAPC
CQHREVPPLCHSERCCSPPPDYEAALLYPCF
NT seq
3876 nt
NT seq
+upstream
nt +downstream
nt
atgttcgatatattatttgtgattatatttggactgacagggcgtgttctgactaaagac
acagacacaaaaggaaggttcagttctccagtgttggatgttacagaaaagcagcttatc
atagagagaaatcagacacttcagttaaactgcaggggacggtgggagctccagtgggtt
ttgccatcaggcgtcccgaaagtctaccacggcacccagatagaagacactagatgcggg
aagaaaaataaccagtattgcagccgcctgacgctcagtcctgctttagctcaacatact
ggctcttaccgctgcaggtaccaccaaaagcagcgcaaacaggcctctgtgtacgtctac
atcacagatagccagcagccgtttgtaaaggtgcagacggagatcccagatgtggtctac
atgaaggagggagagccgttggtcttcccctgcagagtcaccaacccggatgccaaagtc
tcgttggtcaagtttcctttccaccggttaactcctgattatagaaacatcatctggaac
agcaggcaaggtttcactatccgtagtcccacattcttctacatcggactattttcctgt
gagactatcgtcaatggagtcaaacatagtaacaagttcttgactcacaggccagtgaat
aaaatcctagacgtgtatttgaacagcacaggtttggtccacacgttacagggccagatg
ttagcactgaactgcaccgttactgctgaatggaacgccagggtgtccattagctggacg
tacccacaaaaggctaatggatctgccactatcatcagacgcatatcaaagagccgaacc
aacatgctgttctacagtgttctcaccatccccagactgagcaaagcagacagggggctt
tacaaatgtcatgtaacaagtggtccatccaagcgagaaacaaataccacagttattgtc
tatgaccatcctttcattcgactcaagcacagagatggccctgtggttcaggcttctgca
ggacagaaatttttccgtcttactccaaaactaagggcattccctgcacctgaaatcatc
tggttgaaggatgggatggtcgctgccgagcggtgctcccgatatcacgtagacgggttt
tcactggtcattcgggatattgctgaagaggatgcaggaatctacaccatccgaactggc
atccagcagtatggacttttccagaacctcacactcacgttggttgtaaatgtgaagcca
cagattggagaaaagacagtttcctcacagcatcctgcgactgtccagcgaggcagcaga
caagccctgcattgcacctctcatggtgtcccaccacctcaaatccaatggctttggcat
ccgtgccctcccaaaggcctatgcgagaagcctcctccttcgtcctggactgcagtcagt
gagaagacagaagtcacgtccacccacaatcccatcctgaccgtcagccacaggcaggaa
gtgttagaagggaagaataagactgtaggagttttgacagtcggcgaagcattgaaatca
ggcatctatcgttgtgttgcatcaaacttaatgggcagagatgaactggacatccatttc
tatgtcacagatgtcaaaggaggccttatcgtgtctttagaggaagagcccagagaggga
ggggaccttcgtctggtctgtatagccaataggcacctctattcggatctgtcatggtat
agattaacgaatcaatccacagcttcagagggagcttcagttctcagcggggagctcaca
gaggggcagttttctcacacactgcaccttctgctgaagaatgtgactgcacaggattcg
ggaacataccgctgttctgccacacacctgcttacagaagaacattcacaccttgataca
gcagtggaggtcacagttctgcaggcaccggtgctgctgcaaaatctgagtgatcacagt
gttaacgtaagcaactcggtcactcttcgctgcccctctcggggaattccacacccccgg
atcacatggtataaggaccaaaggaagcttcagcaggtgtctggtattatgctgtttcca
gaggaagggactcttcatattgaccgaattacagctgaagaccagggactttacacctgt
aaggccaacaatgagagaggctctgtggagagctccgcccacatttgggttcaaagttca
tctgaatccctctctctggagatcccgactctagcatgtacatgtgtggtggccactttg
ttctggctgcttctcacactgctgattcggaaacttaagcagccaacctcgactaatggc
aaagcagagtacctgccaatcatcctgcatccaggagaggagcctctggttgagcattgt
gacaggttacaatatgatcctgcccagtgggagtttccacgtgaccgccttaaactagaa
aagcccctgggacgaggagcatttgggcgagtaatgcaagcttcagcattcggcatttgc
aattcagccagctgcaccacagtggccgtcaaaatgcttaaagatggcgctacacccagt
gaacacaaagctctgatgacagaactgaagatcctcaatcatattggccatcacctcaat
gtggtcaatcttctcggtgcatgcaccaaacaaggagggcctctgatggtcatagttgaa
tattgtaagtttggcaatctgtctgcataccttaagagcaaacgagaggtgttcttgttg
aacagggtgaacagagaagaggagggaggcatgaaggagggatataaaggacgattggcc
agtgtgtccagcagccagagcaacgccagttcagggtttagtgaggagaaaggagagatc
tcagaggaggacagtggttctcttcctgagtccaacaaccctctgctgcttgaagatctg
atttcttacagctttcaggtagccagaggtatggagtttctcgcgtctcgcaagtgcatt
caccgtgaccttgctgccagaaacatcctgctgtccaacaacaatgtggtgaagatctgt
gattttggtttggcccgagacgtgtacaaagacccagactatgtgcgcaagggagatgca
cggttaccactgaaatggatggcacctgaatcgatctttgacaaagtcttcaccactcaa
agtgacgtgtggtcatatggagttctgctctgggagatcttctcacttggagcgtctcct
tacccggggctgaacattgatgaggagttttgccacagactgaagcaggggactcggatg
tgtcctcctgagtacagcaccccagagatttacagcattatgatggcatgctgggaaaat
aaccctgaggacagaccttctttctcagctcttgtggagatactgggagacctcctgcag
acctgcgtccaacaggatggaaaggattatattccattgaacgcatttatttctggagaa
ggaaatacggtcacggcgcacctcgaccagaaagacataagccagaaaacactaggaact
tcaagctacatcaactctgggaaaatcaaagccatcagcaccttcgaggatctacacaaa
gaagtccctgatgacaaccagtctgacagtggaatggttctcccatctgaagagttgatt
caggtgaaatggatggacagattcaaaaccaaaaacatcactaagttcttctccaaaggt
caaaaccagcacatgacgctgcctgccaaagcgctgccttgtatgaatagcgccccctgt
tgtcagcacagggaagttcctcctctgtgtcactcagagaggtgctgctctcccccacca
gactatgaagctgctctcctctacccctgtttctaa
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