Labeo rohita (rohu): 127155434
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Entry
127155434 CDS
T09007
Symbol
ldlra
Name
(RefSeq) low density lipoprotein receptor a
KO
K12473
low-density lipoprotein receptor
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh03272
Virion - Hepatitis viruses
lroh04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
127155434 (ldlra)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
127155434 (ldlra)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lroh04131
]
127155434 (ldlra)
Membrane trafficking [BR:
lroh04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
127155434 (ldlra)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
SGL
Vgb_lyase
TMEM154
hEGF
Motif
Other DBs
NCBI-GeneID:
127155434
NCBI-ProteinID:
XP_050953584
LinkDB
All DBs
Position
3:complement(31024979..31037973)
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AA seq
870 aa
AA seq
DB search
MESSLVFLLAVAFFCHVQTDVLTCGPRQYQCGNGKCITSRWVCDETDDCGDGTDELPAAC
LAKTCRPSEFSCGGRLNQCVPKSWKCDGKADCENGADEEGCAPRQCLNGEFRCGSGQCVT
AAFVCDDERDCDDGSDEVSCPPTTCSAGSFRCNNAQCVPRLWVCDGDADCADGSDELPQK
CSAGTPKPTKNPCTSMEFHCGSGECIHSSWKCDGGEDCLDRSDEKNCSLPTCRPDEFQCG
DRSCIHGSRQCNHVYDCKDMSDELGCVNATHCEPPHRFKCRSGECISMEKVCNKQRDCRD
WSDEPLRECDSNECLYNNGGCSHICNDLKIGYECLCPTGFQLADKRRCEDIDECANPDTC
SQICVNQIGSYKCECEDGYQMDPASKACKAIGTIAYLFFTNRHEVRKMTLDRSEYTRVIP
RLKNVVALDMNVASREIYWSDLSLKKIYRAPMDTADNSSQHSVVIGSDLDAPEGIAFDWI
HGNIYWTDSIKGAISVATADGSRRKTLFKENLAKPRAIVVDPIKNFMFWTDWGTPAKIER
GGLNGGDRYALVTDNIVWPNGITLDLLNQRLYWVDSKLHTLSSISVQGDGRRTLIIDQGK
LAHPLGLTVFEEKVFWTDVSNNAILSANRVTGSDITKVAEHLSSPEDIVLYHNLKQPSGT
NWCRVNNGGCEFLCLAAPQINRFSPKYTCACPDNMMLASDMRKCVQAVVTTKPPVKPEIV
TTSRPQVPLKTTPKPAGPSTTNVQPSSTPAPVIPNRPTQAAPIKPSQTTTTLPLSTQTDD
HNSNVNALSKASSSTPLALYILLPLAILCLVVGGAVLLWKKWRQKNTNSIHFDNPVYQKT
TEDQVHLCRNGSSEGYFYPQRQIVSIDDEI
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atggagagctcattagtatttttactggcagttgctttcttctgtcatgttcaaacagat
gttttaacttgtggaccacggcagtatcagtgtggcaatggaaagtgtatcacatcgaga
tgggtatgtgatgaaactgatgactgtggtgacggcactgatgaacttcctgctgcctgc
ttggccaaaacctgcagaccgagtgaattcagctgtggtgggcgactaaaccagtgtgtg
ccaaagagctggaagtgtgatggcaaagcggactgtgagaatggtgcggatgaggaaggc
tgtgctcctcggcagtgtctgaatggcgaatttcgctgtggcagcggccagtgtgtgact
gccgcatttgtgtgcgatgatgagagagactgtgatgacggcagtgatgaagtctcctgt
ccgcccaccacgtgtagcgctggctccttcaggtgcaacaacgcacagtgtgtgcctcga
ctgtgggtctgtgatggagatgccgactgtgccgacggctcagacgaattacctcagaaa
tgcagtgcaggaactcctaaacccaccaaaaacccttgcacctctatggaattccattgc
ggcagtggggaatgcatacacagtagctggaaatgcgatgggggagaagattgcttggat
cgctctgatgagaaaaactgctccttgcccacatgccgaccggatgagttccaatgtggt
gacagatcttgcattcatggcagccggcagtgcaaccacgtatatgactgcaaagatatg
agtgatgagctgggctgtgttaatgcaacccattgtgagccgccacacaggtttaagtgc
cgcagtggtgaatgcatcagcatggaaaaagtttgcaacaaacaacgggactgcagggat
tggtccgacgagccattacgggaatgtgattctaacgaatgtctttacaacaacgggggt
tgctctcatatctgtaatgacctgaagattggttacgagtgcctgtgtcccactggcttt
caattggcggacaagagacgctgtgaagacattgatgagtgtgccaacccagacacctgc
agccaaatctgcgtcaaccagataggtagttacaagtgtgagtgcgaggatggctaccag
atggacccagccagcaaggcttgcaaagctattggaaccattgcctacctgtttttcacc
aatcgccacgaggtaaggaagatgactctggatcgtagcgagtatacacgtgtcattccc
cgcctgaagaacgttgtggcactggatatgaatgttgcttccagggagatctactggtcg
gatttatccctcaaaaagatctacagagcaccaatggatacagcagacaactcctcccaa
cacagtgttgtgattggcagtgacttagatgcaccggaaggcatcgccttcgactggatc
cacggaaacatctactggactgacagtatcaaaggcgccatctctgtagcaacagcggat
gggagcagacgcaagactctcttcaaagaaaacctggccaagccacgtgcaattgtggtc
gatcctattaagaacttcatgttctggactgactggggcacaccagctaagatcgagaga
ggtggacttaatggaggggaccgctatgccctggttacagataacattgtctggcccaac
ggaataacccttgaccttttgaaccagcgtctgtactgggtcgactccaaactgcacacc
ctctccagcatcagcgtgcagggagatggtcggcgtactctgatcattgaccagggcaaa
cttgcccaccctctgggtctcactgtttttgaggagaaagtgttttggacagatgtgagc
aataacgcaattctaagtgcgaatcgtgtgactggaagcgacatcacaaaagtggccgaa
cacctttcgtccccagaggacatcgtcttgtaccacaacctcaagcaaccgagtggaacc
aactggtgcagggtcaacaatggtggatgtgaatttctgtgcctggctgcccctcaaatc
aacagattctcacccaagtacacttgtgcttgcccagacaacatgatgttggccagtgac
atgcgaaaatgtgttcaagctgtagtgactacaaaacctcctgtcaagcctgaaattgtt
acaactagtcgtcctcaagtgcctttaaagacaacacccaaacctgctggcccttccact
accaatgtgcaaccttcatctactcctgctcctgtgatccctaatcgacccactcaagct
gccccaatcaagccttcccaaaccacaactacacttcctttatccacccagacagatgac
cacaacagtaatgttaatgctctgtcgaaagcatcatcttccacacccttggctttgtac
attttgcttcctctagcaatcctgtgtttggttgtgggtggcgctgtgctgttatggaaa
aagtggcgtcagaaaaataccaacagcatccattttgacaacccggtttatcaaaagacc
acagaggaccaggtgcatctatgcagaaacggtagttctgaaggctatttttacccacag
agacagattgtgagtattgatgatgaaatatga
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