Labeo rohita (rohu): 127157126
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Entry
127157126 CDS
T09007
Symbol
fads2
Name
(RefSeq) acyl-CoA 6-desaturase
KO
K10226
acyl-CoA 6-desaturase (Delta-6 desaturase) [EC:
1.14.19.3
]
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh00592
alpha-Linolenic acid metabolism
lroh01040
Biosynthesis of unsaturated fatty acids
lroh01100
Metabolic pathways
lroh01212
Fatty acid metabolism
lroh03320
PPAR signaling pathway
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09100 Metabolism
09103 Lipid metabolism
00592 alpha-Linolenic acid metabolism
127157126 (fads2)
01040 Biosynthesis of unsaturated fatty acids
127157126 (fads2)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
127157126 (fads2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
lroh01004
]
127157126 (fads2)
Enzymes [BR:
lroh01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.19 With oxidation of a pair of donors resulting in the reduction of O2 to two molecules of water
1.14.19.3 acyl-CoA 6-desaturase
127157126 (fads2)
Lipid biosynthesis proteins [BR:
lroh01004
]
Desaturase
Front-end
127157126 (fads2)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
FA_desaturase
Cyt-b5
DUF5318
Motif
Other DBs
NCBI-GeneID:
127157126
NCBI-ProteinID:
XP_050956332
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Position
25:25019712..25039790
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AA seq
444 aa
AA seq
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MGGGGQQTDRITGTNGRFSTYTWEEVQKHTKSGDQWIVVERKVYNVSQWVKRHPGGRRII
GHYAGEDATEAFTAFHPDLQLVRKYMKPLLIGELEASEPSQDSQKNAALVEDFRLLREQL
EAEGCFKAQPLFFLLHLGHILLLEAIALMLVWNFGTGWINTAIVAVLLATAQSQAGWLQH
DFGHLSVFKTSRWNHLVHKFVIGHLKGASAEWWNHRHFQHHAKPNVFKKDPDVNMLNAFV
VGKVQPVEYGIKKIKHLPYNHQHKYFFFIGPPLLIPVYFQFQIFHNMFSHGLWVDLVWCI
SYYVRYFLCYTQFYGVFWAVLLFNFVRFLESHWFVWVTQMSHIPMDIDYEKRQDWLSMQL
VATCNIEQSFFNDWFSGHLNFQIEHHLFPTMPRHNYWRAAPRVRALCDKYGVKYEEKSLY
GAFADIVRSLEKSGELWLDAYLNK
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgggcggcggaggacagcagacggaccggatcaccggtaccaatgggcggttcagcacg
tacacctgggaggaggtgcagaaacacaccaagtctggagatcagtggatcgtggtggaa
aggaaggtttataatgtgagccagtgggtgaagagacaccccggaggacggaggatcatc
ggacactatgctggagaagatgccacggaggcgtttactgcgtttcatccagaccttcag
ctggtgaggaaatacatgaagccgctgttaatcggggagctcgaggcgtctgaacccagt
caagacagccagaaaaacgctgctcttgtggaggatttccgactccttcgtgagcagctg
gaagctgaggggtgtttcaaagctcagcccctatttttcctcctgcatcttggtcacatc
ttgcttctggaggccatcgccctgatgctggtatggaactttggaaccggctggatcaac
acggccatcgttgctgttttactggctactgcacagtcgcaggctggatggctgcagcat
gacttcggtcatctgtccgtgtttaaaacctctcgatggaatcacttagtgcacaaattt
gtcattggacacctgaagggagcgtctgccgaatggtggaaccatcgccacttccagcat
cacgctaaacccaacgtgttcaagaaggacccggatgtcaacatgctcaatgcgtttgta
gtgggaaaagtgcagcctgtggagtacggcattaagaagatcaagcatctgccttacaac
catcagcacaagtacttcttctttattggacctcctctgctcattccggtttatttccag
ttccagatctttcacaatatgttctcacatggtctttgggtggaccttgtgtggtgtata
agttactacgttcgatacttcctgtgttacacgcagttctacggtgtgttctgggcagtg
cttctctttaatttcgtaaggttcctggagagtcactggtttgtgtgggtgacccagatg
agccacatccccatggacatcgactacgagaaacgccaagactggctgagcatgcagttg
gttgcaacctgtaacatcgagcaatccttcttcaacgactggttcagcggacacctcaac
tttcagatcgaacaccatctgttccctacgatgcctcggcacaattactggcgcgccgct
ccacgcgtgcgagcgttgtgtgacaaatacggagtcaagtacgaagagaagtccttgtac
ggggcctttgcggacattgtcaggtctttggaaaaatctggagaactgtggctggatgcg
tacctcaacaaataa
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