Labeo rohita (rohu): 127158359
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Entry
127158359 CDS
T09007
Symbol
actb2
Name
(RefSeq) actin, cytoplasmic 2
KO
K05692
actin beta/gamma 1
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh03082
ATP-dependent chromatin remodeling
lroh04145
Phagosome
lroh04210
Apoptosis
lroh04510
Focal adhesion
lroh04520
Adherens junction
lroh04530
Tight junction
lroh04810
Regulation of actin cytoskeleton
lroh04814
Motor proteins
lroh04820
Cytoskeleton in muscle cells
lroh05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
127158359 (actb2)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
127158359 (actb2)
09143 Cell growth and death
04210 Apoptosis
127158359 (actb2)
09144 Cellular community - eukaryotes
04510 Focal adhesion
127158359 (actb2)
04520 Adherens junction
127158359 (actb2)
04530 Tight junction
127158359 (actb2)
09142 Cell motility
04814 Motor proteins
127158359 (actb2)
04820 Cytoskeleton in muscle cells
127158359 (actb2)
04810 Regulation of actin cytoskeleton
127158359 (actb2)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
127158359 (actb2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lroh03021
]
127158359 (actb2)
03019 Messenger RNA biogenesis [BR:
lroh03019
]
127158359 (actb2)
03036 Chromosome and associated proteins [BR:
lroh03036
]
127158359 (actb2)
03029 Mitochondrial biogenesis [BR:
lroh03029
]
127158359 (actb2)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lroh04812
]
127158359 (actb2)
04147 Exosome [BR:
lroh04147
]
127158359 (actb2)
Transcription machinery [BR:
lroh03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
127158359 (actb2)
Messenger RNA biogenesis [BR:
lroh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
127158359 (actb2)
Chromosome and associated proteins [BR:
lroh03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
127158359 (actb2)
NuA4 complex
127158359 (actb2)
Chromatin remodeling factors
BAF complex
127158359 (actb2)
PBAF complex
127158359 (actb2)
GBAF(ncBAF) complex
127158359 (actb2)
SWR1 complex
127158359 (actb2)
Mitochondrial biogenesis [BR:
lroh03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Actin cytoskeleton organization
127158359 (actb2)
Cytoskeleton proteins [BR:
lroh04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actins
Actins
127158359 (actb2)
Exosome [BR:
lroh04147
]
Exosomal proteins
Proteins found in most exosomes
127158359 (actb2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Actin
Motif
Other DBs
NCBI-GeneID:
127158359
NCBI-ProteinID:
XP_050957476
LinkDB
All DBs
Position
3:11565194..11568952
Genome browser
AA seq
375 aa
AA seq
DB search
MDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS
KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL
AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMGTAASSSSLEKSY
ELPDGQVITIGNERFRCPESLFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLS
GGTTMYPGIADRMQKEITSLAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ
EYDESGPSIVHRKCF
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atggatgatgaaattgccgcactggttgttgacaacggatccggtatgtgcaaagccgga
ttcgctggagatgatgctccccgtgctgtcttcccatccatcgtgggtcgccccagacat
cagggtgtcatggttggtatgggacagaaggacagctacgttggtgatgaggctcagagc
aagagaggtatcctgaccctgaagtaccccatcgagcacggtattgtcaccaactgggac
gatatggagaagatctggcatcacaccttctacaacgagctgcgtgttgccccagaggag
caccccgtccttctcacagaggcccccctgaaccccaaggccaacagggaaaagatgaca
cagatcatgttcgagaccttcaacacccccgccatgtacgttgccatccaggctgtgctg
tccctgtatgcctctggtcgtaccactggtatcgtgatggactctggtgatggtgtcacc
cacactgtgcccatctacgagggttacgccctgccccacgccatcctccgtctggacttg
gctggccgtgacctgactgactacctcatgaagatcctgaccgagagaggctacagcttc
accaccacagccgagagggaaattgtccgtgacatcaaggagaagctctgctatgtggct
cttgacttcgagcaggagatgggcactgctgcttcctcctcctccctggagaagagctac
gagctgcctgacggacaggtcatcaccattggcaatgagaggttcaggtgcccagagtcc
ctgttccagccatccttcttgggtatggagtcttgcggtatccatgagaccaccttcaac
tccatcatgaagtgtgacgtcgatatccgtaaggacctgtatgccaacactgtattgtct
ggtggtaccaccatgtaccctggcattgctgacaggatgcagaaggagatcacatccctg
gcccccagcacaatgaaaatcaagatcattgccccacctgagcgtaaatactctgtctgg
atcggaggttccatcctggcctccctgtccaccttccagcagatgtggattagcaagcaa
gagtacgatgagtctggaccatccatcgtccaccgcaaatgcttctaa
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