KEGG   Labeo rohita (rohu): 127158359
Entry
127158359         CDS       T09007                                 
Symbol
actb2
Name
(RefSeq) actin, cytoplasmic 2
  KO
K05692  actin beta/gamma 1
Organism
lroh  Labeo rohita (rohu)
Pathway
lroh03082  ATP-dependent chromatin remodeling
lroh04145  Phagosome
lroh04210  Apoptosis
lroh04510  Focal adhesion
lroh04520  Adherens junction
lroh04530  Tight junction
lroh04810  Regulation of actin cytoskeleton
lroh04814  Motor proteins
lroh04820  Cytoskeleton in muscle cells
lroh05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:lroh00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    127158359 (actb2)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    127158359 (actb2)
  09143 Cell growth and death
   04210 Apoptosis
    127158359 (actb2)
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    127158359 (actb2)
   04520 Adherens junction
    127158359 (actb2)
   04530 Tight junction
    127158359 (actb2)
  09142 Cell motility
   04814 Motor proteins
    127158359 (actb2)
   04820 Cytoskeleton in muscle cells
    127158359 (actb2)
   04810 Regulation of actin cytoskeleton
    127158359 (actb2)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    127158359 (actb2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lroh03021]
    127158359 (actb2)
   03019 Messenger RNA biogenesis [BR:lroh03019]
    127158359 (actb2)
   03036 Chromosome and associated proteins [BR:lroh03036]
    127158359 (actb2)
   03029 Mitochondrial biogenesis [BR:lroh03029]
    127158359 (actb2)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:lroh04812]
    127158359 (actb2)
   04147 Exosome [BR:lroh04147]
    127158359 (actb2)
Transcription machinery [BR:lroh03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     127158359 (actb2)
Messenger RNA biogenesis [BR:lroh03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Factors that have mRNA localization signals
     127158359 (actb2)
Chromosome and associated proteins [BR:lroh03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    TIP60 complex
     127158359 (actb2)
    NuA4 complex
     127158359 (actb2)
  Chromatin remodeling factors
   BAF complex
    127158359 (actb2)
   PBAF complex
    127158359 (actb2)
   GBAF(ncBAF) complex
    127158359 (actb2)
   SWR1 complex
    127158359 (actb2)
Mitochondrial biogenesis [BR:lroh03029]
 Mitochondrial quality control factors
  Mitochondrial dynamics
   Actin cytoskeleton organization
    127158359 (actb2)
Cytoskeleton proteins [BR:lroh04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actins
    Actins
     127158359 (actb2)
Exosome [BR:lroh04147]
 Exosomal proteins
  Proteins found in most exosomes
   127158359 (actb2)
SSDB
Motif
Pfam: Actin
Other DBs
NCBI-GeneID: 127158359
NCBI-ProteinID: XP_050957476
LinkDB
Position
3:11565194..11568952
AA seq 375 aa
MDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS
KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL
AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMGTAASSSSLEKSY
ELPDGQVITIGNERFRCPESLFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLS
GGTTMYPGIADRMQKEITSLAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ
EYDESGPSIVHRKCF
NT seq 1128 nt   +upstreamnt  +downstreamnt
atggatgatgaaattgccgcactggttgttgacaacggatccggtatgtgcaaagccgga
ttcgctggagatgatgctccccgtgctgtcttcccatccatcgtgggtcgccccagacat
cagggtgtcatggttggtatgggacagaaggacagctacgttggtgatgaggctcagagc
aagagaggtatcctgaccctgaagtaccccatcgagcacggtattgtcaccaactgggac
gatatggagaagatctggcatcacaccttctacaacgagctgcgtgttgccccagaggag
caccccgtccttctcacagaggcccccctgaaccccaaggccaacagggaaaagatgaca
cagatcatgttcgagaccttcaacacccccgccatgtacgttgccatccaggctgtgctg
tccctgtatgcctctggtcgtaccactggtatcgtgatggactctggtgatggtgtcacc
cacactgtgcccatctacgagggttacgccctgccccacgccatcctccgtctggacttg
gctggccgtgacctgactgactacctcatgaagatcctgaccgagagaggctacagcttc
accaccacagccgagagggaaattgtccgtgacatcaaggagaagctctgctatgtggct
cttgacttcgagcaggagatgggcactgctgcttcctcctcctccctggagaagagctac
gagctgcctgacggacaggtcatcaccattggcaatgagaggttcaggtgcccagagtcc
ctgttccagccatccttcttgggtatggagtcttgcggtatccatgagaccaccttcaac
tccatcatgaagtgtgacgtcgatatccgtaaggacctgtatgccaacactgtattgtct
ggtggtaccaccatgtaccctggcattgctgacaggatgcagaaggagatcacatccctg
gcccccagcacaatgaaaatcaagatcattgccccacctgagcgtaaatactctgtctgg
atcggaggttccatcctggcctccctgtccaccttccagcagatgtggattagcaagcaa
gagtacgatgagtctggaccatccatcgtccaccgcaaatgcttctaa

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