KEGG   Labeo rohita (rohu): 127160211
Entry
127160211         CDS       T09007                                 
Name
(RefSeq) HLA class II histocompatibility antigen, DP alpha 1 chain-like
  KO
K06752  MHC class II antigen
Organism
lroh  Labeo rohita (rohu)
Pathway
lroh04145  Phagosome
lroh04514  Cell adhesion molecules
lroh04672  Intestinal immune network for IgA production
lroh05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:lroh00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    127160211
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    127160211
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    127160211
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    127160211
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:lroh04147]
    127160211
Exosome [BR:lroh04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   127160211
  Exosomal proteins of epithelial cells
   127160211
  Exosomal proteins of breast milk
   127160211
SSDB
Motif
Pfam: C1-set MHC_II_alpha Ig_2 Ig_3 ig I-set C2-set_2 C2-set_3
Other DBs
NCBI-GeneID: 127160211
NCBI-ProteinID: XP_050958825
LinkDB
Position
Unknown
AA seq 249 aa
MTVRLSSMKMELYITILTLTTVLSTSAEPEHAAFLYAGCSDVEEEFYVGFDDEELGHVDF
KQKTEVETPPAFVETKNISFPRFYEIGVDAIVGCKRDLPTFLETFKSLQLEIDLDAPQTS
IYPKADVQLGIQNTLICHVTGFYPPSVNISWTKNNVIVTEGISLSQYRPRTDDTFHIFST
LKFTPEEGDIYSCTVNHKALQGQPQTKMWDVDVALPSVGPAVFCGVGLSLGLMGVILGTF
FLIKAHNCH
NT seq 750 nt   +upstreamnt  +downstreamnt
atgactgttcgactctcatctatgaagatggagctgtacataaccattctcaccctaacc
actgttctctcaactagtgctgaacctgaacatgccgctttcctatatgctggatgctct
gatgtggaagaagagttttacgttggatttgatgacgaggaattggggcatgtcgacttt
aaacagaagacagaagtagagacaccacctgcttttgtggaaacaaaaaacatatcattt
cccagattttatgaaatcggtgttgatgcaatagtaggatgcaaacgtgacttaccaacg
tttcttgaaacattcaagagcctacaactagaaattgatctagatgcaccccagacatcc
atctatccaaaggcagatgttcagctgggtattcagaacaccctcatctgtcatgtgact
ggcttctaccctccatctgtcaacatctcatggactaagaacaatgttattgtgacagag
ggaataagtttaagccagtaccgtccaaggacagatgatacctttcacatcttctccact
cttaagttcacacctgaagaaggagacatttacagctgtactgtgaaccacaaagctctc
caaggtcaacctcagaccaaaatgtgggatgtagatgttgctcttccaagtgttggtcca
gcagtgttttgtggagtaggtctgtctcttggtctaatgggagtcattttgggaacgttc
ttcctcattaaagcacacaactgtcactga

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