Labeo rohita (rohu): 127161705
Help
Entry
127161705 CDS
T09007
Symbol
sqstm1
Name
(RefSeq) sequestosome-1
KO
K14381
sequestosome 1
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04137
Mitophagy - animal
lroh04140
Autophagy - animal
lroh04217
Necroptosis
lroh04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
127161705 (sqstm1)
04137 Mitophagy - animal
127161705 (sqstm1)
09143 Cell growth and death
04217 Necroptosis
127161705 (sqstm1)
04218 Cellular senescence
127161705 (sqstm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lroh04131
]
127161705 (sqstm1)
03029 Mitochondrial biogenesis [BR:
lroh03029
]
127161705 (sqstm1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lroh04147
]
127161705 (sqstm1)
Membrane trafficking [BR:
lroh04131
]
Autophagy
Mitophagy
Cargo receptors
127161705 (sqstm1)
Pexophagy
127161705 (sqstm1)
Aggrephagy
127161705 (sqstm1)
Xenophagy
127161705 (sqstm1)
ER-phagy
ER-phagy recepters
127161705 (sqstm1)
Other autophagy associated proteins
Midbophagy
127161705 (sqstm1)
Mitochondrial biogenesis [BR:
lroh03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
127161705 (sqstm1)
Exosome [BR:
lroh04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
127161705 (sqstm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA_5
ZZ
PB1
Med3
Motif
Other DBs
NCBI-GeneID:
127161705
NCBI-ProteinID:
XP_050960374
LinkDB
All DBs
Position
Unknown
AA seq
469 aa
AA seq
DB search
MSMTVKAYLIGKDDCNKEIRRFAVDQDVSTSFEYLKRKVLDVFVGLRTAPFQMSYKDEDG
DMIAFSSDDELMMGLALVKDDTFRVYIKQRKEHKHDSSPHGVPGCSFIPPHGGPNFSPPG
PNPMGPPPMGPPGAPHMGPHPHPHHPPPHHPPMLHPGVTCDGCDGPVAGTRFKCTVCPDY
DLCFSCQGKGLHKEHALLPIFHPMANMFEWFPRGKFWRKMRHCMWANTQAQAQAQAQAQN
QAQPGPSGVQQNQDASESMKENGAAASSQANMEYLKNIGEGVAAMLSPLGIDVDIDVEHE
GRRTKVTPTPPASSGSPSAQSESGSIGLLSRGSGPGSQVTEESISEGTKGLKDQGSDEEW
THLSSKEVDPSTGELQSLRLEQDGTDVPAPLSTDSSKSASQGPTGLREAALYPHLPQDAD
PRLVESLSQMLSMGFTDEGGWLTRLLHTKNFDIGSALDTIQYSKPGSQK
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgacagtgaaagcttaccttatcggtaaggacgactgcaacaaggagatccgt
cgctttgccgtggatcaggatgtctcaacaagttttgagtatttgaagagaaaagtgctc
gatgtttttgtagggctcaggactgcgccctttcaaatgtcctataaagatgaggatggt
gacatgattgcattctcctctgacgatgagctaatgatggggttggctcttgtgaaggat
gacaccttccgtgtctacatcaagcaaagaaaggagcacaaacatgattcctcacctcat
ggggttcctgggtgctcattcatcccacctcatggaggccccaactttagccccccagga
cctaatcctatgggtccacctccaatgggtcccccaggagcacctcatatgggtcctcac
cctcatcctcaccaccctcctcctcatcaccctccaatgctgcacccaggggtgacctgt
gatgggtgcgacgggccggtggctggaacacgtttcaagtgcaccgtttgcccagattat
gatttgtgcttctcctgccagggcaaaggcctccacaaggagcatgctctcctgcccatc
tttcaccctatggccaacatgtttgagtggttccctcgtgggaagttttggcgtaagatg
agacactgcatgtgggcaaatacccaggctcaggctcaagctcaagctcaggcccaaaac
caggctcaaccaggtccatctggagtccaacaaaaccaggatgcttctgaaagcatgaaa
gagaatggtgcagctgcctcttctcaggctaatatggagtacctgaagaacattggagag
ggagtggcagccatgttgagcccccttggcatagacgtggacattgatgttgagcatgag
gggagacggaccaaagttacaccaactcctcctgcctccagtgggtcacctagtgctcag
agtgagagtggctccatagggcttctctccagagggtctggtccaggaagtcaggttact
gaagagagcatcagtgagggaacaaaggggctaaaagaccaaggtagtgatgaggaatgg
actcatctcagctctaaagaagtggacccctctacaggagagctgcagtccctcaggctg
gagcaggatgggacagatgttccagccccgctgagtaccgactccagcaaaagtgcctcg
cagggtcccactggtctgcgcgaggcagctctctatccacatcttcctcaagatgcagac
cccaggcttgtggagtctctttctcagatgctctccatgggctttaccgatgagggtgga
tggttgaccagactgctccacaccaagaattttgacatcggatctgccttggatacaatc
cagtactccaaacctggctcgcagaagtag
DBGET
integrated database retrieval system
