Labeo rohita (rohu): 127162711
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Entry
127162711 CDS
T09007
Symbol
ints1
Name
(RefSeq) integrator complex subunit 1 isoform X1
KO
K13138
integrator complex subunit 1
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lroh03041
]
127162711 (ints1)
Spliceosome [BR:
lroh03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
127162711 (ints1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
INTS1_INTS2-bd
INTS1_RP2B-bd
INT1_R3
INTS1_R4
CBP1_cbp8
HTH_RNase_II
Motif
Other DBs
NCBI-GeneID:
127162711
NCBI-ProteinID:
XP_050961517
LinkDB
All DBs
Position
3:complement(9988930..10026724)
Genome browser
AA seq
2199 aa
AA seq
DB search
MNRPKPTSIRRPSNTKPSGHPPPGDFIALGAKSQSSEPKANPALLKPASTGLPPDRKREA
SSSLPSSSSLSSLSKRPKHSTTPPSALSRLAEVAAVDKRSISPSIKEPSVVPIEVSPAVL
LDEIEAAEAEGNDDRIEGVLCGAVKQLKMNRAKPDMTLYLSLMFLAKIKPNVFATEGVIE
ALCSLLRRDASINFKAKGNNLVSVLACNLLMAAYEEDENWPEIFVKVYIEDSLGERIWVD
SSHCKTFVDNIQTAFTTKMPPKSMLLQTETGRSGGDLSAGNSPHPSTPDEDEGQTELLIA
EEKLSPEDDGQVMPRYDELAESVEEYVLDVLRDQLNRRQPMDNVSRNLLRLLTATCGYKE
VRLMAVQRLEMWLQNPKLTRPAQDLLMSLCMNCNTHGSDDMEVISNLIKIRLKPKVLLNH
YMLCVRELLNAHRDNLGTMVKFVIFNELSNARNPNNMQVLHTVLQHSPEQAPKFLAMVFQ
DLLTNKDDYLRASRALLREIIKQTKHEINFQSFCLGLMQERKEATYVDMEFKERFVIQVT
DLLTVSMMLGITAQVKEAGIAWDKGEKKNLEVLRSFQNQIAAIQRDAVWWLHSVVPTISK
VGPKDYVHCLHKVLFTEQPETYYKWDNWPPESDRNFFLRLCSEVPLLEDTLMRILVIGLS
RDLPLGPADAMELADHLVKRAAGVQSDDLEVLRVERIQLIDAVLNLCTYHHPENIQLPTG
YQPPNLAISTLYWKAWLLLLVVAAFNPQKIGLAAWDGYPTLKMLMEMVMTNNYSYPPCTV
ADEETKTEMINRELQISQKERQEILAFESHLAAASTKQTITENNSLLLSQLTSLDPKGPP
RRPPPHVLDQVKSLNQSLRLGHLLCRSRNPDFLLNIIQRQASSQSMPWLADLVQSSEGSL
DVLPVQCLCEFLLHDAADDASSVDDEEEGESKEQRAKKRQRQQKQRQLLGRLQDLLLGPK
ADEQTTCEVLDYFLRRLSSSQVASRVLAMKGLSLVLTEGALKDGEERDHLMEEDSRDAEL
LPGYQWLLQDLPKLPLFDSVRGLTSSALQQAIHVETDPQTISAYLIYLSQHAPVEEQSHH
NDLALDVARLIVERSTIMNCLFSKHSCRPESDAVLSALITIFSAYIRRMRKTKEGEDLYS
WSESQDQVFLRWTTGETATMHILVVHAMVILLTLGPPKGESEFYTLLDIWFPDKKPLPTA
FLVDTSEEALLLPDWLKLRMIRSEVSRLVDAALQDLEPQQLLLFVQSFGIPVSSMSKLLQ
YLDQAVSHDPQTLEQNIMDKNYMAHLVEVQHERGATGGHTFHSLLSASLPSRRDSSEVSR
AKVTVETPHGSVKMRAVSQVPVIGPEDDLAGILLQLFPLKVDPRWPPPPVRPLSLALQQT
LAQEVLRARQGHVQQGGAAGRLLQALAALLNSAHAGALVMAMHHSHTISCPLLRQLHLYQ
RSVSQDVGFSSLFFNAVVQMLTWLENSAVETGPLHSLLKSLAAQYSHKHRITDVRTGFLH
LAEALAYRRDSEVAVRGIIASLRAGEKCNAEPELIRKVLQGLMEVKSPYLEELLALLMTI
GTENGTPGNTAGPVAMVISLLLQETEERGVKIEVDSKISESKKPGSCSGLLVDWLELLDP
EVTSVCSDLQQKLLFAQNKAKSGVSVAPSYRPYLLALLTHQSNWSTLHQCISSLLNKHRD
QRLDPTSALDFLWACSHIPRIWQGRDQKTPQKRTEQFVLKLSSEELISLVDLILSESELS
CRDSGTSKSALDQVSCSLLQSRLPLLHSCLHSDLDNVKKVSEYLISCVKKWGDSIMSKRC
QTLLLQIYLHFPEVIQHIRLPEATLSGEGAADGSTCKLDVLVHRLITLLGDTGDTKSAEN
RASDASLACRKLAVSHPVLLLRHLPMIAALLHGRIHLNLQEIRQQNHLTFFSDVLVVLEL
LQPLVFNSDHQRALQDCLLSFIKVLQHFNVMFLQNFKRSSRMPIINKFVQFIQKYITHDA
ASAVPFLQKHSDVLQGLSTENPDLVQLKSLLAGLTLPVKSGSSESAAEDRDAEDSSSGSL
PLVNISASMPLTAADMTKCLKKISKGEAIEDVFEGLTEVDEKSKRNPEIIQYFVNDLQRL
MSSPEEVCRNMAFSLALRCIQNIPSMAAEFLPTFMYCLGSGNFDVVQTALRNLPEYVLLC
QEHADILLHKAFLVGIYGQIDTSSMIAESMKVLRMEATT
NT seq
6600 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgaccaaagccaacaagcattaggcgaccaagtaacaccaaaccgtcaggtcac
ccacctccaggagatttcattgctcttggagcgaagagtcagagcagtgagccgaaagca
aacccagctctcttgaagccagcgtccaccggtttgcccccagaccgcaagagagaggca
tcgtcttctcttccctcttcctccagcctctccagtctttccaaacggcctaagcactct
acaactccacccagcgctctctcacgccttgctgaggttgctgctgttgacaaacgttca
atatccccctccatcaaagagccatctgtagttcctatagaagtgtctcctgctgtgctt
ctggatgagattgaggcagcggaggcagagggtaacgatgaccgcattgagggtgtgctg
tgcggggctgtcaaacaactcaagatgaaccgagccaagcctgacatgacgctttacctc
agcctcatgtttctcgccaaaatcaagcccaatgtgtttgccacagagggtgtgatagag
gctctctgcagtttgctccgccgtgatgcctcaatcaactttaaggcaaagggaaacaac
ctggtgtctgtgctcgcctgtaacctgttgatggctgcttacgaggaggatgaaaactgg
cctgagatatttgtcaaagtctacattgaggactctctcggtgagcgtatctgggtggac
agctcgcactgtaaaacctttgtcgataatatccagactgccttcacaaccaagatgcca
cccaagagtatgctgctccagacggaaacaggacgatcagggggcgacctaagtgcaggg
aacagccctcatccttccactccagatgaggatgaaggtcagactgagcttttaattgct
gaagagaaactgagtccagaggatgatggacaggtcatgcccaggtatgacgagctggct
gaaagtgttgaggagtatgtcttggatgttttgagggaccagctaaaccgtcgccagccc
atggataacgtgtccaggaaccttttgcgccttctcacggccacctgtggttataaagaa
gtccgactgatggctgtacagagacttgagatgtggttacagaatcctaagttgactcgg
ccagcgcaggatcttctgatgtctttgtgcatgaactgtaatacacatggctcagacgat
atggaggtcatctcgaacctcatcaagatccgcctcaaacctaaagttctcctcaaccac
tacatgctgtgtgtcagggagcttttgaatgctcatcgagataatctaggcaccatggtg
aagtttgtgatctttaatgagctgtcaaatgccagaaatcccaataacatgcaagtgctc
catacagttctgcaacatagcccagagcaggcacccaagtttctggccatggtgttccag
gacctgctgaccaataaagacgactacctgcgggcctcacgcgccttgctcagggaaatc
attaaacagaccaaacacgagatcaacttccagtccttctgtttaggcctcatgcaggag
aggaaagaggccacttatgtagacatggagtttaaagagcgttttgtcatccaagtgaca
gatcttttaacagtgtcaatgatgctggggatcacggctcaggtcaaagaggccggcatc
gcctgggacaaaggagagaagaagaatctggaggtactgaggtcttttcagaaccagatc
gctgccatccagagagatgctgtgtggtggctgcactctgtggttcccaccatcagtaaa
gtgggacctaaagactacgtgcactgtctccacaaagtgcttttcacagagcagcctgag
acgtattacaaatgggacaactggccacctgagagtgacagaaatttctttctccggctg
tgctctgaggttcccctgctggaggacacgctgatgcgcatcttggtgatcggtctctct
cgtgatctgcccctgggcccagctgatgccatggagctggctgatcacctggtgaagaga
gcagcaggagttcagtctgatgacttggaagtgttgcgagttgaaaggatccagctcatt
gatgcagtgctgaacctttgcacttaccatcacccagagaacatccagttgcctacaggc
tatcaacctccaaatctggccatatcaactctttactggaaggcctggctgctgctgctt
gtggtggcagcgttcaacccacagaaaatcggtttggcagcttgggatggttaccccact
ctgaaaatgcttatggagatggttatgacaaataactactcctaccctccatgcactgtg
gccgacgaggagaccaaaactgagatgatcaaccgagagctgcagatctctcagaaggag
aggcaggagatcttggcttttgagagccacctggcagccgcctccaccaaacagacaata
acagagaacaacagcctcctgctgtcccagctcaccagcctagatccaaagggacctcct
cgtaggccaccgcctcatgtcctggatcaagtaaagagcctgaaccagtctttacgactg
ggccatctgctctgccgcagccgcaaccctgacttcctactcaacattatccagagacaa
gcctcttctcaatctatgccgtggttggctgatcttgtccagtccagtgaagggtccttg
gatgtgctgcccgttcagtgcctgtgtgaattcctcctccatgatgctgctgatgacgcc
tcctctgttgatgatgaggaggaaggagaaagtaaagagcagagagcgaagaaaagacag
agacagcagaaacagaggcagcttcttgggcggctccaggacctacttctgggtcctaaa
gctgatgaacagaccacatgtgaggtcttggactacttcctgcggcgtctcagttcttct
caggtggcctcgagagtactggccatgaagggtttgtctctggtgctgaccgagggagca
ttaaaagatggagaggagagggatcatctcatggaggaggactccagagatgccgagtta
ctgccaggctatcaatggctccttcaggacctccctaaactacctctgtttgatagcgtg
agaggcttgacgtccagcgcattgcagcaggccattcatgtggaaactgatcctcagact
atcagcgcatacctgatttacctttcccagcatgccccagtagaggagcagtcgcaccac
aatgacctggccttggatgtggctcgtctgatagtggaacgctccactataatgaactgc
ctcttttccaagcactcttgcaggcctgagtctgatgctgttctttccgctcttatcact
atcttctccgcctatatccgtcgtatgaggaagacaaaggagggagaggatctctatagc
tggtcggagtctcaggatcaagtgttcctgcggtggaccactggagaaacagccaccatg
cacattctggtggtccatgctatggtcatcctgctcacactgggacctcctaaaggggaa
agtgagttctacacactgctggatatctggtttcctgataaaaagccccttcccactgca
ttcctggttgacacgtctgaggaagctcttctgttgcccgattggctgaaattaagaatg
atccgatctgaagtctccagactggtcgatgcagccctacaggatctggagccccagcag
ctgctgttgttcgtccagtccttcgggatccccgtctccagcatgagcaaacttctgcag
tatctggaccaggcagtgtcccatgatcctcaaacactggagcagaacatcatggacaaa
aactacatggctcatctagtggaggtccagcatgagagaggagccacaggtggacacacg
tttcacagtttacttagtgcttcacttccttcacggagagacagctcagaggtgagcagg
gctaaggttaccgttgaaacgccccatggctctgtgaagatgagagcagtgagtcaggtg
ccagtgatcggcccagaggatgatctcgctgggattctactacagctcttccctctaaaa
gtggatcctcgctggcctccacccccggttcggccattgtcattagctctgcagcagacc
ctggcccaggaggtgctgcgggcacgacagggtcacgtccagcagggtggtgccgccggg
cgactcctacaagccttagcagcccttctaaactccgcccacgctggagccctggtcatg
gcaatgcaccacagccatacgatctcctgccctctactgcgccaactccatctttaccag
cggtcggtgtctcaggatgttggcttctcgtcactgttcttcaatgccgttgtgcagatg
ttgacgtggttggaaaactcagcggtagagacaggaccactccacagcctcctgaaatct
ctggcagctcagtactctcacaaacatcgcatcacagatgttcgtactggatttctgcac
ttggctgaagctctggcatacagacgggactccgaagtggcagtgagggggattattgcc
tctctgagagctggggaaaaatgcaacgctgaacctgaactcatacgaaaagtgttgcag
ggcctcatggaggtgaagtctccgtatctagaggagctgttggccctgcttatgaccatt
ggtacagagaacggaaccccaggaaacacagcaggcccagttgctatggtgatatccctg
ctgcttcaggaaacagaggagcgaggggtgaaaatagaggtggattccaaaatcagtgag
tcaaagaagcctggctcgtgttcaggtctgttggttgactggctggagttgcttgaccct
gaggtgacctctgtttgctcagatcttcaacagaagctgctttttgctcaaaacaaggct
aaaagtggtgtgagtgtggccccctcctacaggccatacctgttggccctcctcacgcac
cagtccaactggagcaccttgcatcagtgcatcagctccctgctcaacaaacacagagat
cagagactggacccaacctcagctctagacttcctgtgggcctgcagtcacattccccgc
atatggcaagggcgagatcagaaaacacctcagaagcgcacggagcagtttgtgttgaaa
ctgtcttctgaggaactcataagtcttgtggacctcatcctctctgagtcagagctgagc
tgccgtgactcaggcacctccaaaagcgctttggaccaagtctcctgctctcttctccag
tcacgcttgcccctcctgcatagctgtctccactcagacctggacaatgtcaagaaagtc
tcagaatacctcatcagctgtgttaagaaatggggagacagtataatgagtaagaggtgt
cagacactgctgctgcagatctacctgcacttcccagaggtcatccaacacatccgccta
ccagaggccaccctgagtggagagggggcagcagatggcagcacctgcaagctggatgtc
ctcgtgcatcgtctcatcactctgctgggcgacacaggagacaccaaatcagctgagaac
cgcgcgtctgatgccagtctggcctgtaggaaactggccgtatcacatcctgtgcttcta
ctaagacacttgccgatgatcgctgcgctgttgcacggtcgcatccatctgaacctgcag
gagatcaggcagcagaaccatctgaccttcttcagcgatgttctggttgtcctggagctg
ctgcagccactggttttcaactctgaccaccagagggcactgcaggactgtcttctgtct
ttcatcaaagtcctgcagcattttaatgtaatgttcttgcagaacttcaagagatcatcc
cgtatgcccatcataaacaaatttgtgcagttcatccaaaagtacataactcatgatgca
gcatctgctgtgcctttccttcaaaaacactcggatgtgctacagggactctctactgag
aatccggacttggtgcagctcaagtctttgctcgctggactgactctgcctgtgaagtct
ggttcctctgagagcgctgctgaggacagagacgctgaggattcgtcctccggctccctc
cctctggtcaacatctcagcctccatgccgctgactgcggctgacatgactaaatgcctg
aagaagatctccaaaggagaagcaattgaggatgtgtttgagggtttgactgaagtggat
gagaaatccaaaagaaatccagaaatcattcagtattttgttaatgatcttcaaaggttg
atgagttcccctgaagaagtgtgccgtaacatggcgttcagtctggccctgcggtgcatc
cagaacatccccagtatggctgctgaattcctgccaacgttcatgtactgtctgggcagc
gggaactttgatgtcgtgcagactgcgttgagaaacttgccggaatatgtgctgctctgt
caagaacatgctgatattctcctccacaaggcgtttttagtaggcatctacggtcagatt
gacaccagctccatgatcgcagaatccatgaaagtcttgcgcatggaggcaacgacatag
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integrated database retrieval system
