Labeo rohita (rohu): 127162991
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Entry
127162991 CDS
T09007
Symbol
pdgfbb
Name
(RefSeq) uncharacterized protein pdgfbb
KO
K04359
platelet-derived growth factor subunit A
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04010
MAPK signaling pathway
lroh04020
Calcium signaling pathway
lroh04510
Focal adhesion
lroh04540
Gap junction
lroh04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
127162991 (pdgfbb)
04020 Calcium signaling pathway
127162991 (pdgfbb)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
127162991 (pdgfbb)
04540 Gap junction
127162991 (pdgfbb)
09142 Cell motility
04810 Regulation of actin cytoskeleton
127162991 (pdgfbb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
lroh04052
]
127162991 (pdgfbb)
00536 Glycosaminoglycan binding proteins [BR:
lroh00536
]
127162991 (pdgfbb)
Cytokines and neuropeptides [BR:
lroh04052
]
Cytokines
Growth factors (RTK binding)
127162991 (pdgfbb)
Glycosaminoglycan binding proteins [BR:
lroh00536
]
Heparan sulfate / Heparin
Growth factors/receptors
127162991 (pdgfbb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDGF
PDGF_N
HCV_NS5a_C
Motif
Other DBs
NCBI-GeneID:
127162991
NCBI-ProteinID:
XP_050961922
LinkDB
All DBs
Position
3:29243295..29262056
Genome browser
AA seq
492 aa
AA seq
DB search
MRSRIPLLLAVLAAACLRLGSAEADPLPAAVVELVKGGSVSSIQDLQFLLFSESIEVEPD
SHHDNDTSNRLPRSLLDAQPAQQAICKVRTEVIEVTRSMLDRSNANFLLWPPCVEVQRCS
GCCNTKTLQCVPILTHTRYLQVMKIQYVNKRPLYDKAVVSVLDHVECRCQPAPRPAQRRK
SFGHKQEGRERSGKPRAKDELHRRDELKHNQRISLEDLLSHSWLPKERFSESGFGRDGWG
LNETHYGGGKGHHRHPGDGRRHGKTNDTSTQGTSAPLPNYTEQEETDLSLRNVTQFELQS
NANQSITNQTSDFTMSTLELTNQTFMHQSNLTQENEQLQTTNQTEQFPSNTTGTANQNQR
DVFLSVEENGQKMRGGTTDVEVKKEEREQRQMDKKAKEEEMEELLLLHKILDEDKHKHHH
KVQQTNIQPDEKLQQLHHKQHTYTTTQRTGTTSPPVQHLPPHKPPRPPPHPPKKRRKQRN
RISKSAMRALLM
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgagatcgcggatcccgcttcttctcgcggtacttgcggcggcttgtctgcggttgggc
agtgcggaggctgatcctctcccggccgccgtggttgagttggtgaagggtggatctgta
tcttcaattcaggacctgcagtttttgctgttctctgaatccatagaggttgagccagac
agtcaccatgataatgacaccagcaaccgtctgccacgcagtcttctggacgctcagcct
gctcagcaagccatctgtaaggtcaggaccgaggtcatcgaggtcacacgctccatgttg
gaccgtagcaatgcaaatttcctgttgtggcctccgtgtgtggaggtgcagagatgctcg
ggctgttgtaacaccaagaccctgcagtgtgtgcctatacttacacacacacgataccta
caggtgatgaagatacagtatgtgaacaagcgtccgctctacgataaggctgtcgtctct
gttctcgaccatgtggagtgtcgctgtcagcctgctcctcggcccgctcagcgccggaaa
tcgttcggccacaaacaagaaggacgggaacgctctggaaaacctcgggccaaagatgag
ctccatcgcagggatgagctcaaacacaaccagaggataagcctggaggacctgctcagc
cacagctggcttcccaaagagaggttctctgaatcaggattcggccgggacggctggggt
ctgaacgagacgcactatggagggggcaaaggtcatcaccgtcaccctggggatggaagg
agacacggcaaaacgaatgacacttcaacacaaggaacgtcggctccactgccgaattat
accgaacaggaagaaactgatttgtcattgcgtaacgttacgcaatttgaattgcagagc
aatgctaaccaaagtataaccaatcagacatctgattttactatgagtacattggagttg
accaatcagacttttatgcaccagtcaaatctaacgcaagaaaatgagcagttgcaaaca
accaatcagacagaacaattcccatctaacaccaccggaacagccaatcagaatcagaga
gatgtgtttctgtctgtagaggagaacgggcagaagatgagaggtgggactacggacgta
gaggtgaagaaggaggagcgagagcagagacaaatggacaaaaaggccaaggaggaggaa
atggaagagctgctgctattgcacaaaatcctagatgaagacaaacacaaacatcaccac
aaagtacaacagacaaatatacagccggatgagaaactacagcagctccatcacaaacaa
cacacttacacaaccacacaacggacaggaactacatctcctcctgtgcaacatctccct
ccacacaaaccgcccagaccacctccccaccccccgaaaaagaggagaaaacagcgcaat
cgcatcagcaaatctgccatgagagccctgctcatgtaa
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