Labeo rohita (rohu): 127163317
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Entry
127163317 CDS
T09007
Symbol
pdgfab
Name
(RefSeq) platelet-derived growth factor alpha polypeptide b isoform X1
KO
K04359
platelet-derived growth factor subunit A
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04010
MAPK signaling pathway
lroh04020
Calcium signaling pathway
lroh04510
Focal adhesion
lroh04540
Gap junction
lroh04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
127163317 (pdgfab)
04020 Calcium signaling pathway
127163317 (pdgfab)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
127163317 (pdgfab)
04540 Gap junction
127163317 (pdgfab)
09142 Cell motility
04810 Regulation of actin cytoskeleton
127163317 (pdgfab)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
lroh04052
]
127163317 (pdgfab)
00536 Glycosaminoglycan binding proteins [BR:
lroh00536
]
127163317 (pdgfab)
Cytokines and neuropeptides [BR:
lroh04052
]
Cytokines
Growth factors (RTK binding)
127163317 (pdgfab)
Glycosaminoglycan binding proteins [BR:
lroh00536
]
Heparan sulfate / Heparin
Growth factors/receptors
127163317 (pdgfab)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDGF_N
PDGF
LOH1CR12
Motif
Other DBs
NCBI-GeneID:
127163317
NCBI-ProteinID:
XP_050962447
LinkDB
All DBs
Position
3:3594219..3619499
Genome browser
AA seq
230 aa
AA seq
DB search
MRTLFCCFLLLTSHLLLATAEKEFAIPQDFIDRLSHSEINSISDLQRLLEVNSPGPGNEV
IEEVKQKHHQKSHHSYKAASSDLKSLQLSHRRKRSVVEEAVPAMCKTRTVIYEIPRSQVD
PTAANFLIWPPCVEVKRCTGCCNTGNMRCHPSKKQHRTVKVAKVEFASRKKAKLKEVLVR
LEDHLECVCTSQHHVIEHAEADTGPRTVKNGKKRKHRKQAVAVQINKDIQ
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgagaaccttattctgctgctttctgctcctcacctcgcaccttctgctggcaactgct
gagaaggagtttgcaatccctcaagatttcatcgacagactgtcccacagcgaaatcaac
agcatcagcgacctccagcggctactggaggtaaattccccaggtcctggaaatgaggtg
attgaggaggtcaaacagaagcaccatcagaagagccatcactcatacaaggccgcttcc
tcagatctcaagagcctgcagctgtcccacagacggaagaggagtgtcgtagaggaggcg
gtgcccgccatgtgcaagacacggacagtgatctacgagatcccccgcagtcaagtggat
cccaccgctgcaaacttcctaatatggcctccgtgtgtggaggtgaaacgctgtacaggc
tgctgcaacaccggcaacatgcgctgtcacccctccaaaaaacagcaccgtactgtcaag
gtggcgaaggtagagttcgcatcgcgtaagaaagcgaaattgaaggaggtgctcgtccgg
ttagaggatcatttggaatgtgtgtgcacgtcacagcatcacgtgatcgagcacgcggaa
gcagacacaggcccacgcacagttaaaaatggtaaaaaacggaaacacagaaagcaagca
gtggcagtacagatcaacaaggatatacaataa
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