KEGG   Labeo rohita (rohu): 127163576
Entry
127163576         CDS       T09007                                 
Symbol
rbx1
Name
(RefSeq) E3 ubiquitin-protein ligase RBX1
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
lroh  Labeo rohita (rohu)
Pathway
lroh03420  Nucleotide excision repair
lroh04110  Cell cycle
lroh04114  Oocyte meiosis
lroh04120  Ubiquitin mediated proteolysis
lroh04141  Protein processing in endoplasmic reticulum
lroh04310  Wnt signaling pathway
lroh04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:lroh00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    127163576 (rbx1)
   04120 Ubiquitin mediated proteolysis
    127163576 (rbx1)
  09124 Replication and repair
   03420 Nucleotide excision repair
    127163576 (rbx1)
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    127163576 (rbx1)
   04350 TGF-beta signaling pathway
    127163576 (rbx1)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    127163576 (rbx1)
   04114 Oocyte meiosis
    127163576 (rbx1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:lroh04121]
    127163576 (rbx1)
   03400 DNA repair and recombination proteins [BR:lroh03400]
    127163576 (rbx1)
Enzymes [BR:lroh01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     127163576 (rbx1)
Ubiquitin system [BR:lroh04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   127163576 (rbx1)
  Multi subunit type E3
   SCF complex
    Ring finger protein
     127163576 (rbx1)
   Cul2 complex
     127163576 (rbx1)
   Cul3 complex
     127163576 (rbx1)
   Cul4 complex
     127163576 (rbx1)
   Cul7 complex
     127163576 (rbx1)
   Cul8 complex
     127163576 (rbx1)
   Cul9 complex
     127163576 (rbx1)
DNA repair and recombination proteins [BR:lroh03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      127163576 (rbx1)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      127163576 (rbx1)
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11 zf-RING_16
Other DBs
NCBI-GeneID: 127163576
NCBI-ProteinID: XP_050962828
LinkDB
Position
3:complement(29907851..29909697)
AA seq 108 aa
MAAAMDVDTPSGANSGASKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQ
ASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH
NT seq 327 nt   +upstreamnt  +downstreamnt
atggcggctgcgatggatgtagacaccccgagtggagcgaacagtggagctagtaaaaag
cgttttgaagtgaaaaagtggaatgctgtggctctgtgggcttgggacattgtagtggac
aactgtgccatttgcagaaatcacattatggatctctgtatagagtgtcaggccaatcag
gcgtcagctacatcagaggagtgtacagtggcctggggagtctgtaatcatgcatttcat
ttccactgcatctctcgctggctgaagaccagacaggtgtgtcctttggacaacagagag
tgggagttccagaagtatggccattag

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